Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0070 ATGGATCGAGATCAGGGCTCTTCGAGAAGCAGGAAGCACAAGTACACTCCCAGGCCGCCCAAAGCTCATGCTCCCAAAACCAAACTGGACAATAAACAAGACGAAGACAGCACACCGGCTCGACTTCTCTCGCGTCGATATGAGAATTCTGCGAGACGAGAGCCTAAAGACGAAAGAAAATCAAGCGTGGAAGTTGCATTTAGTCCTGGAGTTTCATCAACCTCCCTCAGGACATATGGCACGAGCAAAGCTATAGATAATGGCACAAACAGTGGCTCGCCGTCTACATATTTTGCCAAAGAGCAAATTCGTTCACGACGTTCTTCTGCTGCTACTGAGGATCAAAATGATACCAGCATGATAGATGTTACTGATAACACCATCAATGCATCAGCCAGGAAATTCAAAAGAGAGTACAAGGAACCATGGGATTATAACAACTCTTATTATCCCATTACACTTCCACTAAGGAAGCCAAATTCTGGAAATCCAGAAATTCTTGATGAGGAAGAATTTGGAGAAGCGGCCACTAGTTTGGAGTATGATGAGAATACTGTTAACTCTGCTGCAGAACTCGAGCTCTTGGAGAAGAGCGAGCAACATAAGATGTTTCTATTTCAGCTTCCTAAAAATATGCCTTTTAACGTGGGGAAGGAGAAGGAGCAAATTGGTACAACAGGATCCGGAAAGGCGCGTGCTTTGGAAGAGTTGCCAAGCGGATATATGGGCAAAATGCAGTTGTACAAGAGTGGAGCAATCAAACTTAAACTAGGAGAAGCTCTGTTCGACCTCTCTCCGGGTACAAAATGTGGATTTGCTCAAGATATTGTAGCGGTGAACATTGCACAGAAACAGATCTGCAATCTTGGCGAGATTAGCAATAAGGTTGTTGTAGTTCCTGATCTTGATTCAATTGATCTGAGAAACACTGGAGGCAAAAATGACTAG 948 0.4399 MDRDQGSSRSRKHKYTPRPPKAHAPKTKLDNKQDEDSTPARLLSRRYENSARREPKDERKSSVEVAFSPGVSSTSLRTYGTSKAIDNGTNSGSPSTYFAKEQIRSRRSSAATEDQNDTSMIDVTDNTINASARKFKREYKEPWDYNNSYYPITLPLRKPNSGNPEILDEEEFGEAATSLEYDENTVNSAAELELLEKSEQHKMFLFQLPKNMPFNVGKEKEQIGTTGSGKARALEELPSGYMGKMQLYKSGAIKLKLGEALFDLSPGTKCGFAQDIVAVNIAQKQICNLGEISNKVVVVPDLDSIDLRNTGGKND* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0070 315 PANTHER DNA-DIRECTED RNA POLYMERASE III 1 308 IPR007811 GO:0003677|GO:0005666|GO:0006383
Vra2g0070 315 MobiDBLite consensus disorder prediction 23 63 - -
Vra2g0070 315 Pfam RNA polymerase III RPC4 219 301 IPR007811 GO:0003677|GO:0005666|GO:0006383
Vra2g0070 315 MobiDBLite consensus disorder prediction 66 105 - -
Vra2g0070 315 PANTHER DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC4-RELATED 1 308 - -
Vra2g0070 315 MobiDBLite consensus disorder prediction 1 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0070 Vra-Chr2 575494 580226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0070 K03026 - gmx:100817982 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0070 2 575494 580226 Vra2g0070 2 575494 580226 ECH