Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0050 ATGTGGAAACTCGGAACCAAATCATCACGTTTTCTTCCTCTGCTGCTGCAACTTCCTAAACACGACGCTTCGCTTTCTCAAAGATTCACCACTGGATTTCCCTTCCACTCGCCCTTCCAGGAAACGAGTGGAATTTCTCCCAAACAAGTAGCTACGGTTATAACTTTTGTTTTAGGAGGTCCTGGTAGTGGAAAAGGTACGCAATGTGCAAAAATTGTTGAAACCTTTGGATATAAGCATCTGAGTGCTGGAGACCTTTTGAGAAGGGAGATGAGTTCTGATAGTAAATATGGCTCAATGATTCTGAATACAATTAAGGAAGGAAAAATTGTTCCATCAGAAGTTACTGTCAAATTGATTCTAAGAGAGATGAAATCTAGTGACAACCGAAAGTTTCTTATTGATGGTTTCCCTAGAAGCGAGGAGAACCGTATAGCTTTTGAACAAATTATTGGAGCAGAACCTCGGTTTGTACTTTTCTTTGATTGCCCTGAAGAAGAGATGGTGAAACGTGTGCTTAGCCGGAATGAGGGTCGAGTTGATGACAATATAGATACAATGAGGAATCGTCTTAAAGTGTTTGAGGCTTTAAGTCTTCCCGTTATTGATTATTATGCTAAGAAGGGGAAACTTTACAGGATCAATGCAGTGGGAACAGCGGATGAAATATTTGAGCAAGTTCGGCCAGTTTTTGAGGCTTGTGAGCTCGAGGCTAAATGA 720 0.4097 MWKLGTKSSRFLPLLLQLPKHDASLSQRFTTGFPFHSPFQETSGISPKQVATVITFVLGGPGSGKGTQCAKIVETFGYKHLSAGDLLRREMSSDSKYGSMILNTIKEGKIVPSEVTVKLILREMKSSDNRKFLIDGFPRSEENRIAFEQIIGAEPRFVLFFDCPEEEMVKRVLSRNEGRVDDNIDTMRNRLKVFEALSLPVIDYYAKKGKLYRINAVGTADEIFEQVRPVFEACELEAK* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0050 239 Gene3D - 48 233 IPR027417 -
Vra2g0050 239 CDD ADK 56 223 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vra2g0050 239 ProSitePatterns Adenylate kinase signature. 132 143 IPR033690 -
Vra2g0050 239 PANTHER UMP-CMP KINASE 46 233 - -
Vra2g0050 239 Hamap Adenylate kinase [adk]. 53 232 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vra2g0050 239 Hamap UMP-CMP kinase [CMPK1]. 52 234 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Vra2g0050 239 Pfam Adenylate kinase 57 209 - -
Vra2g0050 239 PRINTS Adenylate kinase signature 56 69 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vra2g0050 239 PRINTS Adenylate kinase signature 84 98 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vra2g0050 239 PRINTS Adenylate kinase signature 132 148 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vra2g0050 239 PRINTS Adenylate kinase signature 179 194 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vra2g0050 239 PRINTS Adenylate kinase signature 196 210 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vra2g0050 239 PANTHER NUCLEOTIDE KINASE 46 233 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vra2g0050 239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 231 IPR027417 -
Vra2g0050 239 TIGRFAM UMP_CMP_kin_fam: UMP-CMP kinase family 54 231 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0050 Vra-Chr2 449031 452969 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0050 K13800 - gmx:100806842 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0050 2 449031 452969 Vra2g0050 2 449031 452969 ECH