Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0043 ATGGATACAGATGTTGATGCGGAGATCGTGATCGTCGGAGCTGGTATTTGCGGCCTTGCGACAGCCCTTGCCCTTCACAGAAAGAGGATTAAAAGTGTGGTGTTAGAAAGATCAGAGACGGTTCGAGCAACAGGAGCAGCTATAATTGTGCAGGCAAATGGGTGGCGTGCACTTGATGAGCTTGGCATTGGTTCAACACTTAGAGAAACTGCTATTCAAATTCACAGTGTTAATAAGGAATTTCGTTGTTTAAAGCGCACTGATCTGGTGAAAGTCATGGCCGATAATTTACCAACAGGAACTATACGTACCAATTGTCAAGTGCTTTCTGTCGAATTAGATCCTGTAACAAAATTTCCACACCTTATGCTTAGCAATGGAAGTGTTCTTCGAGCTAAGGTTGTTATTGGATGCGATGGTGTGAATTCTGCCATTGCAAGCATGTTTGGGTTACATCGAACCACGCTGAGGCTCTTCTCTACGAGTGTTGCACGAGGCTTCACAAATTATCCAAATGGTCATAAATTTTCCAGTGAATTTGTGATGATGAGCAAAGGTCAAGTTCAACTCGGAAGGCTTCCAGTGACAGACAAACTTGTTTATTGGTTTGTGACAAGGCTAAGGACTTCTAAAGATTCAAAAATCTGGAAAGACCCAGTGCTTATCAGACAATCGTTGATGGAGTCAATGAAAGGTTTCCCAGCAGAGGCGATGGAGATGATGAGAAATAGCAAGTTGAGCTTCTTGCATCTCACCGAGTTGAAGTATAGGCCACCGTGGGACTTGCTTTTCAACAACTTCAGGAAAGGAACGGTAACAATTGCTGGTGATGCAATGCATCCCACAGGCCCATTTGTTGCACAGGGTGGCTCAGCCTCCATTGAAGATGCCATTGTTCTTGCTAGATGCCTTGCACAGAAGATGTTCGATGATAAGAACAAGACAGAGGAAACGACAATAAACAGTGCAATGGCAGAGGAAGCGTTTGATCAATATGTGAAAGAAAGGAAAATGAGAAACTTTTGGCTCTCTTTTCATTCCTTCCTTGTTGGTAAGAAGCTTGACACAACATCATCCATAATCAGATTCATTATCCTTGCAATCATGTCCACTCTATTTAGAGACCCCGATTGGCATTCCCGTTATCATTGTGGAAATCTATAG 1164 0.4304 MDTDVDAEIVIVGAGICGLATALALHRKRIKSVVLERSETVRATGAAIIVQANGWRALDELGIGSTLRETAIQIHSVNKEFRCLKRTDLVKVMADNLPTGTIRTNCQVLSVELDPVTKFPHLMLSNGSVLRAKVVIGCDGVNSAIASMFGLHRTTLRLFSTSVARGFTNYPNGHKFSSEFVMMSKGQVQLGRLPVTDKLVYWFVTRLRTSKDSKIWKDPVLIRQSLMESMKGFPAEAMEMMRNSKLSFLHLTELKYRPPWDLLFNNFRKGTVTIAGDAMHPTGPFVAQGGSASIEDAIVLARCLAQKMFDDKNKTEETTINSAMAEEAFDQYVKERKMRNFWLSFHSFLVGKKLDTTSSIIRFIILAIMSTLFRDPDWHSRYHCGNL* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0043 387 Pfam FAD binding domain 93 306 IPR002938 GO:0071949
Vra2g0043 387 SUPERFAMILY FAD/NAD(P)-binding domain 8 376 IPR036188 -
Vra2g0043 387 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 5 387 - -
Vra2g0043 387 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 5 387 IPR044560 -
Vra2g0043 387 Pfam NAD(P)-binding Rossmann-like domain 11 40 - -
Vra2g0043 387 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 - -
Vra2g0043 387 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 269 284 - -
Vra2g0043 387 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 300 - -
Vra2g0043 387 Gene3D - 8 358 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0043 Vra-Chr2 404495 407971 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0043 1 387 Miscellaneous Gene Families AT5G05320 33.492 2.39e-70 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0043 - - gmx:100775200 622.854