Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0040 ATGAGGGGAAAGGCAGCTTCGGGAAAGACAATTTTGTTCGTATGCATTGCATGCTTTCTTGCAGGAACACTCTTTAGTGGCCAGATATGGACACGACCCTCTAACCATGAAAATACACTGCAACCATCCACCCCCGATTGTGATCACAAGCGAAAACTGATTGAAGGCAGATCTGTTGATGTAATGGAGGAAGTGGTGAAGACTCATCAAGCTATCAAGTATCTGGATAAGGCAGTTTCGACGTTGGAAATGGAACTGACAGCAAGTAGGAGAAGCCAGAGTGGTGGGAAGCAAATGCGAAAGCTTAATGTACAAAAGGCTTTTGTGGTGATTGGTATTAACACAGCTTTTAGCAGCAAAAGGCGAAGAGACTCTATACGAGAAACATGGTTACCTAGAGGGAATGAGTTGAAGGAACTGGAGAAAGAGAAGGGCATTGTTGTAAGGTTCGTGATCGGGCACAGCAGCACACCAGGGGGAGTTTTGGATAAAGCAATCGATGCAGAAGAGGCAGAACACAAGGACTTCCTGAGGTTAGACCACGTCGAGGGCTATCATGAGCTATCCACCAAGACTCGTCTCTACTTTTCCACCATCACTTCATTGTGGGATGCTGATTTCTACGTCAAGGTAGACGATGATGTCCACTTAAATCTAGGAACGCTAGTGAGCACACTTGCCAAGTACCGATCAAGACCCAGGGTTTACATTGGTTGCATGAAATCTGGTCCTGTTCTATATCAAAAAGGAGTAAAGTATCACGAGGCTGAGCACTGGAAGTTTGGAGAGGAAGGAAACAAGTACTTCAGGCATGCCACTGGCCAAATATATGCCATTTCCAAGGATCTCGCCACTTATATATCAATCAATTGGCCAATATTGCACAAATATGCAAATGAAGACGTATCTTTAGGTTCGTGGTTACTGGGCCTCGAAGTTGAACATGTGGATGAACGGTCCATGTGCTGCGGAACACCACCAGATTGTGATTGGAAGGCAAGGACAGGGAATGTGTGTGTGGCATCATTTGATTGGTCATGCAGTGGTATCTGTAAGTCGGTCGAGAGAATGAAAGACATACACAAAGCTTGTGGAGAAGGACACGGAGTTGTTTGGAACATTGAACTCTGA 1131 0.4527 MRGKAASGKTILFVCIACFLAGTLFSGQIWTRPSNHENTLQPSTPDCDHKRKLIEGRSVDVMEEVVKTHQAIKYLDKAVSTLEMELTASRRSQSGGKQMRKLNVQKAFVVIGINTAFSSKRRRDSIRETWLPRGNELKELEKEKGIVVRFVIGHSSTPGGVLDKAIDAEEAEHKDFLRLDHVEGYHELSTKTRLYFSTITSLWDADFYVKVDDDVHLNLGTLVSTLAKYRSRPRVYIGCMKSGPVLYQKGVKYHEAEHWKFGEEGNKYFRHATGQIYAISKDLATYISINWPILHKYANEDVSLGSWLLGLEVEHVDERSMCCGTPPDCDWKARTGNVCVASFDWSCSGICKSVERMKDIHKACGEGHGVVWNIEL* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0040 376 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 6 367 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vra2g0040 376 Pfam Galactosyltransferase 121 317 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vra2g0040 376 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE 8-RELATED 6 367 - -
Vra2g0040 376 Pfam Domain of unknown function (DUF4094) 7 91 IPR025298 -
Vra2g0040 376 Gene3D - 97 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0040 Vra-Chr2 377328 380171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0040 4 376 Glycosyltransferase AT1G77810 61.619 1.88e-179 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0040 K20855 - gmx:100776291 696.812