Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0038 ATGAAAATGGTTACAAGCAAGAACAACCAAAAACATTTTGTATTCAGGAAAATGGGAATATGGGAACATGCAAGAGCATCAGCAGTAGCAATGCTGCTTCTGCTTCTGTGCTTGAATGAGATTGCACATGTAAACTCGCAGAGGGTACCTGCTTTGTTTGTTTTTGGAGATTCATTGGTTGAAGTTGGCAACAATAATTTCCTAAACACCATCGCAAGAGCAAATTTCTTCCCCTACGGCATCGACTTCAACGGTGGTGCTACTGGCAGATTTTCTAATGGCAGATCCCTCGTTGATTTCATTGGAGAAATGCTGGGCGTTCCTTCTCCTCCACCTTTTGCAGATCCCTCCACGACTGGATCCAGAATACTCAATGGCGTCAATTATGCATCGGGTGCTTCCGGCATTCTTGACGAGTCAGGAAGAAACTATGGTGATCGGTTTACCATGAACCGGCAAATCCAGAACTTTGAGAGCACTTTGAATCAGTACAGGACAATGATGAATCCTGCTGCGTTGAGTCAGTTCTTGGCCAAGTCTATAGCAATTGTGGTAACCGGAAACAATGACTACATCAATAACTACCTCATACCTGGCCTTTATAACTCCAGTTATAATTACAATGCCCAGCAGTACGGTAGTCTTCTTGTTAACAATTTAGGGAGACAAATTTTGGCACTGCATAGTATGGGGATAAGAAAGCTCTTGATAGCAGGAATTGGGCCACTGGGTTGCATTCCTAATATTCGAGCGATTGGTTTAACCCCACCAGGAAGATGCATGGACTCGGTTAATCAGATGGTTGGATTCTTCAACGTAGGGCTTAGATCGATGGTGGAGCAACTGAACAGAGATCATCCTGATTCCATCTTTGTATACGCCAACACTTACCATGTCTTGGGCGATATCCTGAACAACCCTGCGAGATACCAGTTTAATGTTGTGGACAGAGCTTGCTGTGGAGTGGGAAGAAACAGAGGTCAGATATCATGTCTGCCATTGGAAATTCCATGTCTGAATAGAAAGCAGACGGTGTTTTGGGATGCCTTCCACCCATCAGAATCCACCATTTATGTGTTTGCTTGGAGAGCTGTTAATGGACCACAGGATGATTGTTATCCTGTTAATCTCAAACAAATGGCTCTCATTTAA 1152 0.4366 MKMVTSKNNQKHFVFRKMGIWEHARASAVAMLLLLLCLNEIAHVNSQRVPALFVFGDSLVEVGNNNFLNTIARANFFPYGIDFNGGATGRFSNGRSLVDFIGEMLGVPSPPPFADPSTTGSRILNGVNYASGASGILDESGRNYGDRFTMNRQIQNFESTLNQYRTMMNPAALSQFLAKSIAIVVTGNNDYINNYLIPGLYNSSYNYNAQQYGSLLVNNLGRQILALHSMGIRKLLIAGIGPLGCIPNIRAIGLTPPGRCMDSVNQMVGFFNVGLRSMVEQLNRDHPDSIFVYANTYHVLGDILNNPARYQFNVVDRACCGVGRNRGQISCLPLEIPCLNRKQTVFWDAFHPSESTIYVFAWRAVNGPQDDCYPVNLKQMALI* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0038 383 Gene3D SGNH hydrolase 40 369 IPR036514 -
Vra2g0038 383 Pfam GDSL-like Lipase/Acylhydrolase 52 354 IPR001087 GO:0016788
Vra2g0038 383 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 29 382 - -
Vra2g0038 383 CDD SGNH_plant_lipase_like 50 354 IPR035669 -
Vra2g0038 383 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 29 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0038 Vra-Chr2 369903 371767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0038 49 380 Acyl Lipid Metabolism Gene Families AT4G10950 35.928 1.41e-70 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0038 - - gmx:100782184 546.584