Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0029 ATGAGTTGCTCTTCCGGAACAGTATTATCAGTATGTGCATCACTCTCTTCTCCACTGCCTCCGTCTCGCACGCCCAATCCCAATTCCAATTCGCTTTCATTTTCATTTTCATTTTCATGGCTTTCTTCATTTCCCTCATTAACTTTAAGTACATCTCGCTCCGCCAAAAACCCTCCCAATCCCTCACGCTCCCAGGATTCTTTCATTCGAGCTGCCTATACCCGAAGGTCTCGTGGTGAAGCTGCAAAGAAGCCGAGCAGGAAATCATGGAAGCAAAGGACAGATATGTACATGAGACCATTCTTGTTAAATGTTTTCTTCTCAAAAAGATTTATTCATGCAAAAGTGGTACACCGTGGAACGAGCAAAGTCATATGTGTTGCTACCACAAACGCCAAGGATCTTCGAAACTCCCTTCCATCCTTGATAGATCATAACGCATGTAAAGTGGTTGGAAGGCTTATTGCCGAGCGATCAATGGAAGCTGATGTATTTGCAGTGGCGTATGAACCCAGAAAGGATGAAAGAATTGAAGGTAGACTAGGCATTGTTCTTGATACAATTAAGGAAAACGGCATTATTTTTATTTGA 591 0.4264 MSCSSGTVLSVCASLSSPLPPSRTPNPNSNSLSFSFSFSWLSSFPSLTLSTSRSAKNPPNPSRSQDSFIRAAYTRRSRGEAAKKPSRKSWKQRTDMYMRPFLLNVFFSKRFIHAKVVHRGTSKVICVATTNAKDLRNSLPSLIDHNACKVVGRLIAERSMEADVFAVAYEPRKDERIEGRLGIVLDTIKENGIIFI* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0029 196 Gene3D Ribosomal protein S11 60 196 IPR036967 GO:0003735|GO:0005840|GO:0006412
Vra2g0029 196 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 29 195 IPR005484 GO:0003735|GO:0005840|GO:0006412
Vra2g0029 196 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 98 195 IPR005484 GO:0003735|GO:0005840|GO:0006412
Vra2g0029 196 SUPERFAMILY Translational machinery components 91 193 - -
Vra2g0029 196 CDD Ribosomal_L18_L5e 90 193 - -
Vra2g0029 196 MobiDBLite consensus disorder prediction 50 69 - -
Vra2g0029 196 PANTHER OS02G0689700 PROTEIN 29 195 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0029 K02881 - gmx:100803727 283.493