Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0028 ATGGCGGAAGGGGAAGAGATTCGGCCTGACTTGCTGAAAAACACGCCGTCTAACATTGCGAGATTGGAGGATGTGATCGAACACTCTAAAGCGAGGCAGAAGTATCTGGCGCAGACGTGTAGCCCCTCTGATGGCGGTGATGTTAGGTGGTATTTTTGTAAGATCCCTCTCGCTCCCAACGAGTTGGCAGCGTCAGTCCCACGAACGGAGATTGTAGGCAAGAGTGACTATTTTCGTTTTGGCATGAGAGATTCTCTAGCCATTGAAGCATCTTTCTTGCAGAGAGAGGAAGAACTGCTTTCTAGTTGGTGGAGGGAGTACGCGGAATGCAGTGAAGGCCCAAGAGAACGGCAAAGTTCCACTACAAAGTCAGATACCGGATCTTTTCTGGGACGTAGTGAACCATCTCAACTCTATGAAATAGAAGAAGAGAGGGTTGGTGTCCCTGTAAAGGGAGGACTGTACGAGGTAGACTTGGTTTCCAGACATTGTTTCCCTGTTTATTGGAACGGAGAAAACAGACGTGTCCTAAGAGGCCATTGGTTTGCACGTAAAGGGGGCCTGGATTGGCTACCACTTCGTGAAGACGTTTCTGAACAACTAGAGATTGCTTATCGAAGTCAGGTTTGGCACCGAAGGACATTCCAACCATCAGGACTTTTCGCTGCTCGAGTTGATTTGCAAGGCTCCACTCAGGGCCTGCATGCCCTTTTCACAGGAGAAGACGACACCTGGGAGGCCTGGCTAAATATTGATGCTTCTGGCTTTTCTAGTTTTGTTAGTTTTACTGGAAATGCAATCAAGCTTAGACGTGGTTACTCTCCATCAAATTCTCCAAAACCAACCCAGGATGAACTAAGACAGCAGAAGGAGGAGGCTATGGATGATTACTGCTCCCAGGTCCCTGTTCGTCACTTGGTATTTATGGTTCATGGTATTGGCCAAAGGTTGGAAAAATCCAATTTAGTTGATGATGTGGGCAATTTCCGGCATATTACAGCAAGTCTTGCAGAGCAGCACCTTACTGCTCATCAGCGTGGCACCCAAAGGGTCCTCTTTATTCCATGCCAGTGGAGAAAAGGTTTGAAGCTGAGTGGTGAAACTGCTGTTGAAAAAATAACATTAGATGGAGTGCGGGGATTGCGTGTCACATTGAGTGCAACTGTTCATGATGTATTATACTACATGAGCCCAATTTACTGTCAAGACATAATTGACTCGGTATCTAACCAACTGAATCGATTATATCTGAAGTTTCTCAAAAGGAATCCTGGATATAATGGAAAGGTTTCATTATATGGTCATTCTCTGGGAAGTGTTCTCTCATATGATATCCTTTGCCATCAAGATAATCTATCATCTCCGTTTCCTATGGAATGGATGTATAAGGAACATGATCAAAATGAAAAGTCACTCCCTAATAAAGAATATAATAATGTGCAGAACTCACTAATCAATCCGGATGACACTTTTAGTATGGTGAGTCCCTCTGAGGAAAATAAGGGTACTCAACATACTAGTCCAGATATGGAGGCAGAATATTGTGAGGAGTCTTCAGTTTTAGGTCCTGAGTTATCAAGTGTACGTGAATTTTCTGCAGAACCTAGCTTTGTGGAACCAAATAACAAGGGAGATGTTTCTGAGTTCCTTTCTGATTCCAGCTACACGAATGTTGAAAAAATGGATGCGTTGGATGAGCCTGAGAGCATGAATGTTGGGTTGCCAGCAGATACGGACGAATGTAAAGTTGCAAGAAATAAAGATGAAGTAATAAACAAGCTCAGAGAAGAGATTGATTCATTGAAAGCTGAATTGGAATCACGTCATAGCATTAATCAAACCGAGGAAGAATTACATTCTGTACAGAAGTTATCTAAAAAGTCACCTGCCATACAAGATGCACCAAAGAGTTATACCCCGTATATAAAGTACACAAAGCTTCAGTTCGAGGTCGATACATTCTTTGCCGTTGGATCTCCTCTTGGTGTATTTCTTGCACTTCGTAATATTCGCATAGGCATTGGTAAAGGACAAGAATATTGGGAGCAGGAAAATATAAGAGAAGAGATGCCAGCTTGTAGGCAGTTATTCAATATTTTTCACCCCTATGATCCAGTAGCATACAGGATAGAGCCACTTGTATGTAAAGAATACATCAGCCAACGACCAGTTTTGATTCCATATCACAGAGGAGGGAAAAGGTTGCACATTGGATTTCAGGAATTTACTGAAGACTTAGCAGTTCGAACTCACTCAGTAAAGAATTATATGATTTCTGCAAGGGATAAGGTAATCACATTGTGCCAGTCGAGGAAATTTGATAACTCAGAAGGGGAGAGTTCGGAAGAGGAAGAAGAGACATCATATGGATCTTTCATGATAGAGAGGTTAACAGGAAGCAAGAGTGGTCGGATTGATCACATGCTTCAGGACAAGACCTTTGAGCATCCATATCTGCAAGCGATTGGAGCACATACAAACTATTGGCGGGACTATGATACCGCACTTTTTATATTAAAACACCTGTATCGAGATACACCAGAAGATCAAGATATAATAGAAGATCCCGATTTGTCAATCGTATCTAGCATGGACAAATCAAAACAAGAGAGTACCTCTGTTGGCTGGTATGAACCAAGAGACACCATAGAGGAAGATCTTCCGTTAACTTTCTCGGACAAGGTTATGGTCCGAAGCTTCTCGAGCAAAGCTAAGAAGGTTCTGCAGAAGCACACTGCACCTAATTACTAA 2751 0.4278 MAEGEEIRPDLLKNTPSNIARLEDVIEHSKARQKYLAQTCSPSDGGDVRWYFCKIPLAPNELAASVPRTEIVGKSDYFRFGMRDSLAIEASFLQREEELLSSWWREYAECSEGPRERQSSTTKSDTGSFLGRSEPSQLYEIEEERVGVPVKGGLYEVDLVSRHCFPVYWNGENRRVLRGHWFARKGGLDWLPLREDVSEQLEIAYRSQVWHRRTFQPSGLFAARVDLQGSTQGLHALFTGEDDTWEAWLNIDASGFSSFVSFTGNAIKLRRGYSPSNSPKPTQDELRQQKEEAMDDYCSQVPVRHLVFMVHGIGQRLEKSNLVDDVGNFRHITASLAEQHLTAHQRGTQRVLFIPCQWRKGLKLSGETAVEKITLDGVRGLRVTLSATVHDVLYYMSPIYCQDIIDSVSNQLNRLYLKFLKRNPGYNGKVSLYGHSLGSVLSYDILCHQDNLSSPFPMEWMYKEHDQNEKSLPNKEYNNVQNSLINPDDTFSMVSPSEENKGTQHTSPDMEAEYCEESSVLGPELSSVREFSAEPSFVEPNNKGDVSEFLSDSSYTNVEKMDALDEPESMNVGLPADTDECKVARNKDEVINKLREEIDSLKAELESRHSINQTEEELHSVQKLSKKSPAIQDAPKSYTPYIKYTKLQFEVDTFFAVGSPLGVFLALRNIRIGIGKGQEYWEQENIREEMPACRQLFNIFHPYDPVAYRIEPLVCKEYISQRPVLIPYHRGGKRLHIGFQEFTEDLAVRTHSVKNYMISARDKVITLCQSRKFDNSEGESSEEEEETSYGSFMIERLTGSKSGRIDHMLQDKTFEHPYLQAIGAHTNYWRDYDTALFILKHLYRDTPEDQDIIEDPDLSIVSSMDKSKQESTSVGWYEPRDTIEEDLPLTFSDKVMVRSFSSKAKKVLQKHTAPNY* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0028 916 SUPERFAMILY alpha/beta-Hydrolases 395 461 IPR029058 -
Vra2g0028 916 SMART DDHD_2a 647 844 IPR004177 GO:0046872
Vra2g0028 916 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 27 856 - -
Vra2g0028 916 PANTHER BNAA08G07860D PROTEIN 27 856 - -
Vra2g0028 916 ProSiteProfiles DDHD domain profile. 647 844 IPR004177 GO:0046872
Vra2g0028 916 Pfam DDHD domain 798 843 IPR004177 GO:0046872
Vra2g0028 916 Pfam DDHD domain 647 784 IPR004177 GO:0046872
Vra2g0028 916 Coils Coil 584 611 - -
Vra2g0028 916 MobiDBLite consensus disorder prediction 271 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0028 Vra-Chr2 290716 305895 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0028 3 910 Acyl Lipid Metabolism Gene Families AT1G31480 63.901 0.0 1164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0028 - - gmx:100777360 1606.65