Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0026 ATGGTGGATGGAGATAAAGAGAAAACAGCACGAGAGAAGAAAAGAGAAGAGATGGCAGAGAATGTGATGAATGCGATTCAGTACGAGAAGTATGGAGGAGGTCCCGGTGGCTTGAAGCACGTTAAAATTGGAGTTCCCAGTCCAAAGAAGAAGGAGGTTTTGGTGAAAGTGGAAGCTGTTAGCATCAATCCAGTCGATTGGAAGATTCAGAAGGGTGTTATGAGACCTTTATTTGTCCCCGGAAACTTTCCTCATACACCTTGCACCGATATCGCCGGAGAGGTGGTTCAGATCGGACCACAAGTCAACGATTTCAAAGTTGGAGACAAAGTCCTTTCCAGACTCTCTACTCGATATGGAGGTGGATTGGCTGAGTTTGCTGTGGCTAGTGAGAGCTTAACAGCTTTGAGGCCACCTGAAGTCTCGGCTGCTGAAGCTGCAGCGTTACCTATTGCCGGGCTCACAGCTCGTGATGCCCTCGCTCAAATTGCGGGAGTCAAGCTTGATGGGACTGGTGAGCCTAAGAACGTTCTGGTAACTGCTGCTTCAGGTGGTGTAGGTCACTATGCTGTTCAACTGGCAAAACTAGGGAACAACCATGTCACAGCGACTTGTGGGGCTCGGAACATTGAGTTTGTTAAGGGCTTAGGTGCTGACGAGGTTCTTGACTACAGGACGCCGGAGGGGGCAGCGCTCAAGAGTCCATCTGGTAGGAAATATGATGCAGTCATAAACTGCACAACTGGAATACCTTGGTCGACTTTTGATGCTAATTTGACTGAAAAGGCGGTGGTGGTTGATTTAACTCCTAATCCATCTTCATTTCTGACTGCTGCACTTAAGAAAGTTACTTTTTCGAAGAAGCGGCTGGTGCCATTTTTTGTAGATGTCAAGCGTGAGGGCCTGGACAATCTACTTCAGTTATTGAAGGATGGGAAACTCAAGTCTGTTATTGATTCCAGGTTTCCTTTGAGCAAAGCCGAAGATGCTTGGGCTAAGAGCATTGATGGCCATGCCACTGGAAAAATCATTGTGGAGCCATAG 1044 0.4751 MVDGDKEKTAREKKREEMAENVMNAIQYEKYGGGPGGLKHVKIGVPSPKKKEVLVKVEAVSINPVDWKIQKGVMRPLFVPGNFPHTPCTDIAGEVVQIGPQVNDFKVGDKVLSRLSTRYGGGLAEFAVASESLTALRPPEVSAAEAAALPIAGLTARDALAQIAGVKLDGTGEPKNVLVTAASGGVGHYAVQLAKLGNNHVTATCGARNIEFVKGLGADEVLDYRTPEGAALKSPSGRKYDAVINCTTGIPWSTFDANLTEKAVVVDLTPNPSSFLTAALKKVTFSKKRLVPFFVDVKREGLDNLLQLLKDGKLKSVIDSRFPLSKAEDAWAKSIDGHATGKIIVEP* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0026 347 PANTHER ZINC-BINDING DEHYDROGENASE FAMILY OXIDOREDUCTASE 21 347 - -
Vra2g0026 347 Gene3D - 30 345 - -
Vra2g0026 347 Pfam Alcohol dehydrogenase GroES-like domain 51 114 IPR013154 -
Vra2g0026 347 SMART PKS_ER_names_mod 33 345 IPR020843 GO:0016491
Vra2g0026 347 Pfam Zinc-binding dehydrogenase 216 345 - -
Vra2g0026 347 CDD MDR1 26 345 - -
Vra2g0026 347 PANTHER ZINC-TYPE ALCOHOL DEHYDROGENASE-LIKE PROTEIN C16A3.02C 21 347 - -
Vra2g0026 347 Gene3D - 160 298 - -
Vra2g0026 347 SUPERFAMILY GroES-like 20 168 IPR011032 -
Vra2g0026 347 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 141 294 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0026 Vra-Chr2 286177 287824 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0026 K00224 - gmx:100790762 540.036