Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0019 ATGGGGAATGAGTTGGAAGAAGCAGTGGTGGTAGCAGAAGAGAAGGAGGAGAGGGACGATGTGGTGGTTGGCGCGGTTGACTACAGCGGTGGATGCGCCGTGAGATCCAAATCTGGGTCGTGGAGATCCGCTTGGTTTATCATAGGCGTGGAAGTGGCGGAGAGGATTGCGTATTACGGGATTCAGGGGAACATGATATCGTATCTCACGGGGCCTCTTCATCAGAGCACCGCCACCGCCGCAGAAAACGTCAACATTTGGTCGGGAACTGCTTCCTTGCTTCCTCTCGCCGGTGCTTTCCTTGCAGATTCTCGTCTCGGCCGCTACCGCACCATCGTACTCGCTTCCCTCGTCTACATTCTGGGTCTTGGACTGTTAACACTATCAGCTCTGCTTCCTTCTCTCTCCAACTCTGAGTGTCAAGTCGACAATGAATTGAAATCATGCTCTCCTCGCTGGCAAATAATTTTGTTTTTCATCTCTCTTTATTTGATCGCCATTGGGCAAGGTGGACATAAGCCCTGTGTTCAGGCTTTTGGGGCAGATCAATTTGATGAACAACATCCAAAGGAGCACAAAGATAGAAGCACGTTCTTTAATTGGTGGTATTTCACTATGTGTGCTGGATGCTTAGCAACTCTTTCGATCTTGAACTATATTCAGGACAACCTTAGTTGGGTTCTTGGATTTGGAATTCCTTGCGCTGTCATGATTGTTGCATTAATTGTTTTCTTGTTAGGAACAATGACATACAGGTTTACCATTCAGCAGCGAGACAAAAGGCCCTTTCGCAGAATTGGCCGTGTATTTGTCGCTGCTATAAAAAATCGGCGAACCAACCATTCAACCACAGCTATCAAAGTAGAACGTGATGGAATACTTCCTCATCAAAGTTCTGAACAGTTCGAGTTCCTTAACAAAGCGTTATTAGAGTTAAAGGATGAGGATTCCATAGAAGAGGAGAGTTGTAGCCCAAGTGAAGTGGAAGAAGCTAAAGCAGTACTAAGGTTGGTTCCCATTTGGTCTACAACGCTGATTTATGCTATAGTCTTTGCTCAAGTTCCAACATTCTTTACTAAGCAAGGGGTTACTTTGGAGAGAACACTGTTACCTGGCTTTGATATACCTCCTGCATCTCTTCAAACACTTACGACTGCGGCCATCGTTCTCTTCAGTCCCATCTATGACCGCTTATTTGTGCCAGCGGCGAGAGCTATCACTGGCAAACCCTCAGGCATAACAATGCTGCAAAGAATTGGGACTGGCATTTTTTTATCCGTGTTCACTGTAGTATTTGCAGCCTTTGTAGAGACCAAGAGATTGAAAACAGCTCAAGAGTATGGTGTTGTAGATGAACCTAATGCAACTGTTCCAATGAGTATATGGTGGTTAGTTCCCCAATATATGTTGTTCGGAATCTCTGAAGTTTTTACAATGGTTGGTCTGCAGGAGTTTTTCTATGACCAGGTCCCAAATGAACTAAGAAGCATGGGTCTTGCTCTGTACTTGAGCATATTTGGTGTTGGGAGCTTTATAAGCGGCTTTCTGATTTCCGTGATAGAGAAAGTGACAAGTAAAGACGGAGAAGACAGTTGGTTTGCTAATAATCTGAACAAGGCGCATCTTAATTACTTTTACTGGCTACTTGCTGCTCTCAGTGTCATGGGATTGGCCCTCTTCACTTACTTTGCTAAATCTTACATTTACAATAACAAAGGTATCAGGCGACAATAG 1734 0.4469 MGNELEEAVVVAEEKEERDDVVVGAVDYSGGCAVRSKSGSWRSAWFIIGVEVAERIAYYGIQGNMISYLTGPLHQSTATAAENVNIWSGTASLLPLAGAFLADSRLGRYRTIVLASLVYILGLGLLTLSALLPSLSNSECQVDNELKSCSPRWQIILFFISLYLIAIGQGGHKPCVQAFGADQFDEQHPKEHKDRSTFFNWWYFTMCAGCLATLSILNYIQDNLSWVLGFGIPCAVMIVALIVFLLGTMTYRFTIQQRDKRPFRRIGRVFVAAIKNRRTNHSTTAIKVERDGILPHQSSEQFEFLNKALLELKDEDSIEEESCSPSEVEEAKAVLRLVPIWSTTLIYAIVFAQVPTFFTKQGVTLERTLLPGFDIPPASLQTLTTAAIVLFSPIYDRLFVPAARAITGKPSGITMLQRIGTGIFLSVFTVVFAAFVETKRLKTAQEYGVVDEPNATVPMSIWWLVPQYMLFGISEVFTMVGLQEFFYDQVPNELRSMGLALYLSIFGVGSFISGFLISVIEKVTSKDGEDSWFANNLNKAHLNYFYWLLAALSVMGLALFTYFAKSYIYNNKGIRRQ* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0019 577 Gene3D MFS general substrate transporter like domains 11 575 IPR036259 -
Vra2g0019 577 Pfam POT family 109 532 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra2g0019 577 CDD MFS_NPF5 41 569 IPR044739 GO:0042937|GO:0042938|GO:0071916
Vra2g0019 577 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 25 573 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra2g0019 577 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT-LIKE PROTEIN 25 573 - -
Vra2g0019 577 SUPERFAMILY MFS general substrate transporter 38 565 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0019 Vra-Chr2 257206 260856 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0019 26 568 Organic Solute Cotransporters AT1G22540 66.667 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0019 K14638 - gmx:100776720 880.167