Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1920 ATGACTGAGGAGAAAAACAAAATGGATTTCATTCAATTGCTTGGACCTGACATGTCAGTCAAGATTCTGACCCATTTGGACGCCCCTTGTGATCTTATTAGGGTTTCTGCTGTTTCTAGTTCTTGGCACCGATTTGTTATTGAACATGGCCTTTGCAAGCAACTTTGCTTGGCAATGTTTCCTGAAATATGTGGTCTTACTCATATGATTGAGCTTGAGAACATTATTGAACCACTGGGCAACCCTCCTGGAAGTTGTGTAAATTGGGAGTATCTAAAGAGAAATCATAAAGTCTATGCATTCTTGTCCTCTGGTCTTCATCCTGTGAGAAAAAGTTGTATCTCTAAAGCTATTAGTGCATCTAGCACTGATAACTATCCTGAAGAAAGCATTCTACATACGTTGGAGCCTGGTGATAGAACTGAATATACAGCATCATACTGGTCAAGCAAAGGGGAAAACGATCCTTCTGTTCCTGAGACTTTAGTTTACAAGCTTGTTTCAGAAATGTGTCTTGTTACAGAGATTCATGTCCAACCGTTCCAAGCATTTTTTCAGCATGGCTTGCCTATATATTCTGCTAAGGCTGTCCGATTCAGAATGGGATATCCAAGATACCCAATTGAATCGGAGAGTGCTGTAGATAATATAACTGCTAATGAAGTCTTGGGCGATAATCAATTCATATGGACGTATACTTCACCTGAATTTCCAATGTGTCAAGAAAACAGCTTGCAAAAATTCAAGCTCCCTGAACCTTTTCTGTGCATTGGAGGCATTCTGCTAGTTGAGCTATTGGGTAGAGTTCAAAAACAAGAGATGGATGAATTATTCTACATATGCATCTCCCATGTTCAAGTCATGGGACGGCCACTTTCACCAGCATTTGATGTTAAAGTTCATCATCCATCAGGGAAGTGTACCTTGAAGTACCATCCTCCTCCGGCAGATCCTCACATGTCTTCTTCAACATCTTCGCCGGACTCGAGCAGTTCATCGCGCCTGCGCATAATAACCTCGAGCCTAGTGCAGAGGGGTGTGAGACGTTGGGAGCAAATTCTCTTGGGTGCACTACTTGGTTCTGGTCCTGTTGCAGTTGATGACTAA 1107 0.421 MTEEKNKMDFIQLLGPDMSVKILTHLDAPCDLIRVSAVSSSWHRFVIEHGLCKQLCLAMFPEICGLTHMIELENIIEPLGNPPGSCVNWEYLKRNHKVYAFLSSGLHPVRKSCISKAISASSTDNYPEESILHTLEPGDRTEYTASYWSSKGENDPSVPETLVYKLVSEMCLVTEIHVQPFQAFFQHGLPIYSAKAVRFRMGYPRYPIESESAVDNITANEVLGDNQFIWTYTSPEFPMCQENSLQKFKLPEPFLCIGGILLVELLGRVQKQEMDELFYICISHVQVMGRPLSPAFDVKVHHPSGKCTLKYHPPPADPHMSSSTSSPDSSSSSRLRIITSSLVQRGVRRWEQILLGALLGSGPVAVDD* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1920 368 MobiDBLite consensus disorder prediction 318 332 - -
Vra1g1920 368 MobiDBLite consensus disorder prediction 307 332 - -
Vra1g1920 368 Gene3D - 1 107 - -
Vra1g1920 368 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 5 361 - -
Vra1g1920 368 SUPERFAMILY F-box domain 6 81 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1920 Vra-Chr1 36459210 36462049 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1920 - - gmx:100786763 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g1920 1 36459210 36462049 Vra1g1920 1 36459210 36462049 ECH