Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1905 ATGCCTTCAAAATCTCACTTCTCATATGCCCTTCTTCTCAAAGTTTCCCTTCTCTCTGCAGTTTCATTCCAATTCATGTCTAGGCTCATGGAACCACTTTCTGTGGGAAGAGTGATAGGAGAAGTGGTTGACATTTTCAGCCCAAGTGTGAGAATGAATGTGACATATTCCACCAAGGAAGTTGCTAATGGTCATGAGTTAATGCCTTCTACTGTTATGGCCAAGCCACGCGTGGAGATTGGTGGTGATGACATGAGAACTGCTTATACCTTGATCATGACAGACCCAGATGCTCCAAGTCCTAGTGATCCATATCTAAGGGAACATCTTCACTGGATGGTTACAGATATCCCTGGCACCACAGATGTCTCTTTTGGAAAAGATATTATGGCGTATGAGAGTCCAAAACCAGTAATAGGAATCCACAGATATGTGTTCATCTTGTTCAAGCAGAGAGGAAGACAAACAGTGAGAGCTCCTTCTTCAAGAGACCATTTCAACACAAGGAGATTCTCGCAAGAGAATGGCCTTGGTCTACCAGTTGCTGCAGTTTACTTCAATGCTCAGAGAGAGACTGCTGCAAGGAGAAGGTGA 594 0.4394 MPSKSHFSYALLLKVSLLSAVSFQFMSRLMEPLSVGRVIGEVVDIFSPSVRMNVTYSTKEVANGHELMPSTVMAKPRVEIGGDDMRTAYTLIMTDPDAPSPSDPYLREHLHWMVTDIPGTTDVSFGKDIMAYESPKPVIGIHRYVFILFKQRGRQTVRAPSSRDHFNTRRFSQENGLGLPVAAVYFNAQRETAARRR* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1905 197 PANTHER CEN-LIKE PROTEIN 1 30 196 - -
Vra1g1905 197 Gene3D - 21 197 IPR036610 -
Vra1g1905 197 Pfam Phosphatidylethanolamine-binding protein 76 186 IPR008914 -
Vra1g1905 197 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 89 111 IPR001858 -
Vra1g1905 197 SUPERFAMILY PEBP-like 29 192 IPR036610 -
Vra1g1905 197 CDD PEBP_euk 50 188 IPR035810 -
Vra1g1905 197 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 30 196 IPR035810 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1905 Vra-Chr1 36207221 36208721 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1905 K06910 - gmx:100174966 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g1905 1 36207221 36208721 Vra1g1905 1 36207221 36208721 ECH