Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1853 ATGCAAGAGGACAGCGGATCGGGGCCTTCTCGTCATTCCAATAAGGACGAAATCTGGTTGCCGGTCATAAAATCTCTGCCACGATCCGTGGTGGTTCTCCTCTTCCCCGCCGTGCTCATCATCGGCGTGTTGGCTTACACGCGTGAGACACAACCTACACTTTCTGGAATTTCATCTACCAAATCTTCATTAAGCACCACACGTACCTTCAAAATCCCTTTCAGTGTTCAAAGAGAGACTCCATTGAACTGCAATGTATACAACCTCACAAGAACATGCCCAACCAATCAAGACCCAATCAAAGAGGATGATCAGAGCCGTCCATCCGGTGCCACGTGTCCAGACTACTTCCGTTGGATTGAGGAGGACTTGAGACCGTGGGCCTACACAGGCATAACACAAGAGATGGTGGAGAGGGCAAAGCAGCCACCACCATTGTTTCGATACTGTGGAAATGATGATACCTTGGACATTGTCTTCCCTGATTGGTCTTTCTGGGGATGGGCTGAGGTTAATATAAAGCCATGGGAGATTTTGCTGGGAGAGTTGAAAAAAGGGAACGAGAGAATACCATGGCTCAACAGAGAGCCTTATGCATACTGGAAAGGTAATCCATCTGTTGCAGAAACCAGAGAAGACCTCATGAAATGCAATGTTTCTCAAAATCAAGAATGGAATGCTCGTTTATATGCTCAGAATTGGAAACGAGAATCAGAAGAAGGGTTTAAGAAATCAGAATTGGCAAGCCAATGCACTCATAGATATAAGGTGTACATTGAAGGTTCTGCTTGGTCAGTGAGTGAAAAATATATCTTGGCATGTGACTCCGCCACTCTACTTGTGAAGCCACATTACTATGATTTTTTCTCAAGAGGACTCATACCAGGGCACCACTATTGGCCCATAAAGGAAGATGACAAGTGCAGGTCCATTAAGTTTGCTGTAGATTGGGGGAACAGTCACAATCAAAGGGCACATCAAATTGGAAAGGCAGGAAGTGAATTCATTCAAGAAGAGTTGAAGATGGATTTTGTGTACGACTACATGTTTCATCTTCTGAATGCATATGCTAAACTGTTCACATACAAACCCTCCATTAGTGGTAATGCTACTGAACTGTGTGTGGAGTCAATGGTTTGTGGAGCAGAAGGATTGGAAAAGAAATTTATGATGGAATCATTGGTGAAGGGTCCTGCAGACACCGACCCTTGCACGATGCCTGCCCCTTTTGATCCTCCATCTTTGTACGCACAATTACAGAGAAAGAAAAGTTCAATTCAACAAATTGAATCATGGGAAAGAAGTTACTGGGAGAATCAAAACATAACATCTTAG 1335 0.4404 MQEDSGSGPSRHSNKDEIWLPVIKSLPRSVVVLLFPAVLIIGVLAYTRETQPTLSGISSTKSSLSTTRTFKIPFSVQRETPLNCNVYNLTRTCPTNQDPIKEDDQSRPSGATCPDYFRWIEEDLRPWAYTGITQEMVERAKQPPPLFRYCGNDDTLDIVFPDWSFWGWAEVNIKPWEILLGELKKGNERIPWLNREPYAYWKGNPSVAETREDLMKCNVSQNQEWNARLYAQNWKRESEEGFKKSELASQCTHRYKVYIEGSAWSVSEKYILACDSATLLVKPHYYDFFSRGLIPGHHYWPIKEDDKCRSIKFAVDWGNSHNQRAHQIGKAGSEFIQEELKMDFVYDYMFHLLNAYAKLFTYKPSISGNATELCVESMVCGAEGLEKKFMMESLVKGPADTDPCTMPAPFDPPSLYAQLQRKKSSIQQIESWERSYWENQNITS* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1853 444 PANTHER MOTIF-CONTAINING PROTEIN 1, PUTATIVE-RELATED 141 442 - -
Vra1g1853 444 PANTHER MOTIF-CONTAINING PROTEIN 1, PUTATIVE-RELATED 26 141 - -
Vra1g1853 444 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 26 141 - -
Vra1g1853 444 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 141 442 - -
Vra1g1853 444 SMART cap10 112 363 IPR006598 -
Vra1g1853 444 Pfam Glycosyl transferase family 90 141 433 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1853 Vra-Chr1 35395120 35399677 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1853 - - pvu:PHAVU_004G116000g 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g1853 1 35395120 35399677 Vra1g1853 1 35395120 35399677 ECH