Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1838 ATGGCCCATAACATTAGCTTGAGATGTTTGGCAATGGTTGTCATTGCATTTTTCTTCACAGTGCAAGGAACTCTTGGGGAGGTAGAATGCGAGCGTTTGAGCGAGGACACGTGTGCATTTGCGGTGTCATGGGAGGGAAAACGGTGCGTGCTGGAGAAGCGTGTGAAGAGAAGCGGGGAAGAGGCTTACACGTGCCGGACTTCAGAGATTGAAACGGAAATACAAAACGGACACATTGAAACGGAGGACTGCATAAAGGGTTGTGGTTTGGACAGAAAATCCTTTGGAATCTCTTCGGATTCTCTTCTTGAGGTTGGGTTCACCAAAAACCTATGCTCCCCTCACTGCTACCAAAACTGTCCCAACATTGTTGACCTATATTTCAACCTTGCAGCCGGTGAAGGTGTGTTTCTTCCCGGATTGTGTGCATCAGTAGGTGCAAATGCTCGTCGACAAACGGCTGAGATCAGAAGCTCTGGTTTGGTGGAATCAGGACCACTGAGCTCTCTGCTATTGGCTCCAGCTTCTCCACAAGCACTGGCACTTGCTCCATTGCCACAGTTCTAA 567 0.4885 MAHNISLRCLAMVVIAFFFTVQGTLGEVECERLSEDTCAFAVSWEGKRCVLEKRVKRSGEEAYTCRTSEIETEIQNGHIETEDCIKGCGLDRKSFGISSDSLLEVGFTKNLCSPHCYQNCPNIVDLYFNLAAGEGVFLPGLCASVGANARRQTAEIRSSGLVESGPLSSLLLAPASPQALALAPLPQF* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1838 188 PANTHER PAR1 PROTEIN 1 177 IPR009489 -
Vra1g1838 188 Pfam PAR1 protein 28 171 IPR009489 -
Vra1g1838 188 PANTHER PAR1 PROTEIN 1 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1838 Vra-Chr1 35186676 35188218 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1838 - - gmx:100778782 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g1838 1 35186676 35188218 Vra1g1838 1 35186676 35188218 ECH
Vra1g1838 1 35186676 35188218 Vra8g2231 8 40643026 40644084 PCT