Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1830 ATGGCTTCCTTCACGTGCTCCCCCACCTCCCTCCAGCTTCGATTGGCCTTCGCCGCACCCAAATTCCCCCTTACCCCGCACTTGCGAATGCGCAACCTCAAAATGAATCGCGTTCGCCCTCTACGCGCCGAGCGGGACGGTGCCGCCTCGGAGTGGACTGGGTCCGGGCTAAACCTCGACGGCTTCTCCGGCTGGTCCGACACCGACGCCGAGCAACAGAACGACAAGAAGGAGTCCTATGGAGGAGTTGTGGGAGTAGGATTGGCTGGAGTGCTTCTCCTTTCAGGGCTTACCTTTGCTGCCTTATCTCTGGGCAAACAAACCGGTTCCAGACCAGAGCAGCACATGAAGCCCTTGACTACCCAGCAGGAGGAAGTTTTGTCTTCTGATGATCATAATAATGAAACAACAGAACAAACAAATGTTGATAAGGTGGAGCAAGGAAATGATAAAATAGAAGGAGATCTGCCCAACTACGATGGTGCTGAACCACCACACCTTAATGCTGTTCAGCATGATGAAATAACCAGTTCAAGTGGAAGTGTTACTTTTGGTTTTAGCGAAACCTATTCTAGTTCAGGTGCTGATAACGAGACTGAAATTGTTAGTGTTGTGGTCAGTCCCGAGTCAAATAACACGATTTCAGATCATAAGTTTTTCAATGAAGCTGTTGAAGAAAATATTCTGTCAGCTTCAGAGAAAGAAAGCCTTGATCTGAACAAAATTCCACAGGTCTCTGCTGAGGGAAATGAGCCATCCCTCGAAGAGTGGAGCATTCCTGGAAATGATGTGTTTGAAGAATCACCTGTTTTATTATCAGCCAATGCACTGGTAGATGAGAAGGTTATGAATGATAATTATGAGGTTGATGAAGTTAAATCTGAATCTCCAAATTTTAGATCCTTTTTCTCTGTTCCTGGTATTCCCGCTCCATCAGTAGTTTCTGCAAATGCACAAGTGTTTCCTGGAAAGGTTTTAGTTCCTGCAGCTGTTGATCAAGTCCAGGGGCAAGCACTAGCTGCACTACAAGTTTTAAAGGTCATTGAGCCTGATGTTCAACCTAGTGATTTATGTACTCGTCGAGAATATGCTCGCTGGTTGGTGTCTGCTAGCAGCACTCTTTCAAGGAGCACTGTTTCGAAAGTGTATCCGGCCATGTACATAGACAATGTTACTGAGCTTGCATTTGACGATGTCACCCCGGACGATCCTGATTTTTCTACCATTCAAGGCTTGGCAGAAGCTGGACTTATTGAGAGCAGGCTTTCAAGACAAGATATACAATTGTCTGGTGATGAAGATGATAGTCCATTTTACTTCTCCCCTGGAAGTCCTTTATCGCGTCAAGATCTTGTCAGTTGGAAAATGGCCCTGGAGAAAAGACAGCTTCCAGAAGCTGACAGAAAGACACTGTACCAACTTTCTGGTTTTCTGGACACTGATAAGATACATCCTAATGCATGCCCTGCCCTAGTAGCTGATCTATCTGCTGGCGAGCATGGAATAATAGCTCTTGCTTTTGGTTATACAAGATTGTTCCAGCCAGATAAGCCAGTTACAAAAGCTCAAGCAGCTATGGCTCTAGCTACTGGAGAAGCTTCTGAAATAGTTAGTGAAGAGCTTGCACGCATCGAAGCAGAATCTATTGCTGAAAATGCTGTTGCTGCTCATAGTGCTTTAGTAGCTCAGGTAGAGAAGGATATCAATGCAAGTTTTGAGCAGGAGCTTTTATTAGAGAGGGAAAAGATCAATGCTGTTGAAAAAATGGCTGAGCAGGCAAGACTCGAGTTAGAAAGGTTAAGAGCTGAGAGAGAAGAGGATAACCTTGCATTGACAAAGGAGCGTGCTGCTATTGACTCAGAAATGGAGGTTTTTTCAAAGTTAAGGCATGAGGTTGAGGATCAATTACAAATCCTTATGAATGACAAGGTAGAAATAGCACATGAAAAAGAGAGGATTAACAAACTCCGGGAACAAGCAGAAGTTGAAAACAAGGAGATTGCTCGTTTACAATATGAGCTAGAGGTAGAACGTAAAGCCCTGTCTATGGCCAGGGCTTGGGCAGAGGATGAGGCCAAACGAGTGAGAGAGCAAGCAATAGCCTTAGAGGAGGCTAGAGATCGTTGGGAGAGGCATGGGATCAAAGTGGTAGTTGACGATGACCTCCGCAAGGAGGCCTCCGCTGGAGTTACATGGCTCAATGCCTCAGAGCAGATTTCGGTTCAAGGAACAGTCGACAGGGCCGAGAACTTATTGGACAAGCTCAAACTAATGGCATCAGATATCAGAGGAAAATCTAGAGACATACTTGACAAAATCATTCACCTGGTCTCCCAATTTATATCAAAATTGAGGGAATGGGCATCCAGAACAGGAAAACAAGCTGAAGAATTTGGAGAAGCTTCCATATCAAAGGTAGGTAAGTCAGCCAGTGAGTTGCAACAAAGTGCTATTGAAGTTGGATTTGGTATCAAAGAAGGTGCAAAGCGTGTTGCTGGTGATTGTAGAGAAGGGGTTGAGAAAATCACTCAAAAATTCACACAGAAGTTCAAGACCTGA 2559 0.4498 MASFTCSPTSLQLRLAFAAPKFPLTPHLRMRNLKMNRVRPLRAERDGAASEWTGSGLNLDGFSGWSDTDAEQQNDKKESYGGVVGVGLAGVLLLSGLTFAALSLGKQTGSRPEQHMKPLTTQQEEVLSSDDHNNETTEQTNVDKVEQGNDKIEGDLPNYDGAEPPHLNAVQHDEITSSSGSVTFGFSETYSSSGADNETEIVSVVVSPESNNTISDHKFFNEAVEENILSASEKESLDLNKIPQVSAEGNEPSLEEWSIPGNDVFEESPVLLSANALVDEKVMNDNYEVDEVKSESPNFRSFFSVPGIPAPSVVSANAQVFPGKVLVPAAVDQVQGQALAALQVLKVIEPDVQPSDLCTRREYARWLVSASSTLSRSTVSKVYPAMYIDNVTELAFDDVTPDDPDFSTIQGLAEAGLIESRLSRQDIQLSGDEDDSPFYFSPGSPLSRQDLVSWKMALEKRQLPEADRKTLYQLSGFLDTDKIHPNACPALVADLSAGEHGIIALAFGYTRLFQPDKPVTKAQAAMALATGEASEIVSEELARIEAESIAENAVAAHSALVAQVEKDINASFEQELLLEREKINAVEKMAEQARLELERLRAEREEDNLALTKERAAIDSEMEVFSKLRHEVEDQLQILMNDKVEIAHEKERINKLREQAEVENKEIARLQYELEVERKALSMARAWAEDEAKRVREQAIALEEARDRWERHGIKVVVDDDLRKEASAGVTWLNASEQISVQGTVDRAENLLDKLKLMASDIRGKSRDILDKIIHLVSQFISKLREWASRTGKQAEEFGEASISKVGKSASELQQSAIEVGFGIKEGAKRVAGDCREGVEKITQKFTQKFKT* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1830 852 Coils Coil 576 617 - -
Vra1g1830 852 Coils Coil 745 765 - -
Vra1g1830 852 MobiDBLite consensus disorder prediction 108 140 - -
Vra1g1830 852 MobiDBLite consensus disorder prediction 108 127 - -
Vra1g1830 852 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 170 846 - -
Vra1g1830 852 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 2 150 - -
Vra1g1830 852 Coils Coil 685 712 - -
Vra1g1830 852 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 170 846 - -
Vra1g1830 852 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 2 150 - -
Vra1g1830 852 ProSiteProfiles S-layer homology (SLH) domain profile. 392 469 IPR001119 -
Vra1g1830 852 Coils Coil 639 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1830 Vra-Chr1 34903483 34911442 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1830 - - aprc:113867512 1278.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g1830 1 34903483 34911442 Vra1g1830 1 34903483 34911442 ECH