Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1828 ATGGCTTCTGTCTCCCTTCTTCTCGCCCTGCTCGTCTTCTTCGTAATTGGCACTTCTCTTTCAAACAGTAGGAAGGAATTAAGGGACAAGGAGAAAGCTGCATTACAGATGTTAGAGGGCTCAGTTCATTATTCCAACAGTATCAACCCATCACGTGTTGTCCAAATCTCTTGGCAACCAAGGGTTTTTCTATACAAAGGTTTTTTGTCTGATAAGGAGTGTGACTACCTTATCTCTGTGGCATATGAAGAAAAATCCTCAGGGAATGGTGGAACTTCCTTGGTGATGGAAGATGATATTCTTGCAAGGATTGAAGAAAGACTTTCAGTTTGGACTTTCCTTCCTAAAGAGAACAGCAAGCCTTTGCAAGTCATGCAATATGGGTCGGAGCAGAATGATCGAACCTTAGATTATTTTACAAACAAAACCAATTTGGAATTGAGTGGACCTTTAATGGCAACAGTTGTTTTATATCTCTCGGACTCTACTAAAGGGGGTCAAATTCTCTTTCCTGAATCAGTGCCAAGGAGTAGCAGTTGGTCAAGTTGCAGTAACAGTAATAAGACCATACAACCAGTAAAAGGGAATGCAATTCTGTTTTTCTCTCTTCACCCAAGTGCTTCTCCTGACAAGAGTAGTCTTCATTCTAGATGCCCTGTGCTTGAAGGGAACATGTGGTCTGCAATTAAATACTTCTATGCGAAACCAATTAGAAGAAGCAAGGTCTCAGCCATATCAGAAGACGATGAATGTACTGATCAAGATGAGAACTGTCCTGCATGGGCAGCTATGGGAGAATGTCAAAGAAATCCTGTCTTCATGGTTGGATCCCCTGATTATTATGGTACGTGTAGGAAAAGTTGTAATGCATGTCTGATAACAAGTTGA 888 0.4122 MASVSLLLALLVFFVIGTSLSNSRKELRDKEKAALQMLEGSVHYSNSINPSRVVQISWQPRVFLYKGFLSDKECDYLISVAYEEKSSGNGGTSLVMEDDILARIEERLSVWTFLPKENSKPLQVMQYGSEQNDRTLDYFTNKTNLELSGPLMATVVLYLSDSTKGGQILFPESVPRSSSWSSCSNSNKTIQPVKGNAILFFSLHPSASPDKSSLHSRCPVLEGNMWSAIKYFYAKPIRRSKVSAISEDDECTDQDENCPAWAAMGECQRNPVFMVGSPDYYGTCRKSCNACLITS* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1828 295 Gene3D q2cbj1_9rhob like domain 52 233 - -
Vra1g1828 295 PANTHER PROLYL 4-HYDROXYLASE 12-RELATED 3 291 - -
Vra1g1828 295 SMART ShkT_1 250 292 IPR003582 -
Vra1g1828 295 Pfam 2OG-Fe(II) oxygenase superfamily 123 233 IPR044862 -
Vra1g1828 295 ProSiteProfiles ShKT domain profile. 251 291 IPR003582 -
Vra1g1828 295 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 3 291 IPR045054 -
Vra1g1828 295 SMART p4hc 60 233 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1828 Vra-Chr1 34874703 34878268 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1828 K00472 - gmx:100795761 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g1828 1 34874703 34878268 Vra1g1828 1 34874703 34878268 ECH