Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1782 ATGAAGAAAGTGGTGTTAAAGATGGACTTACATGATGACAAGATCAAACGAAAAGCTATGAAGACAGCATCAGGCATTTCAGGGGTTGATTCAATTTCTGTTGACTTGAAAGACATGAAGTTGGTGCTATTGGGTGAGATTGATCCAGTGAGTGCAGTTTCGAAGCTACGAAAATGGTGTCACACAGAATTAGTTTCGGTTGGACCGGCAAAAGAGGAGAAAGAAAAGGAGGAGCCAGCAAAAGTAGCTGTTCCTGTCTATGAACCCTACCCCTTCTATTATTATCCTTATCATATGACATCACCATTGTATTCTTAA 318 0.4025 MKKVVLKMDLHDDKIKRKAMKTASGISGVDSISVDLKDMKLVLLGEIDPVSAVSKLRKWCHTELVSVGPAKEEKEKEEPAKVAVPVYEPYPFYYYPYHMTSPLYS* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1782 105 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 94 - -
Vra1g1782 105 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 94 - -
Vra1g1782 105 Pfam Heavy-metal-associated domain 8 58 IPR006121 GO:0046872
Vra1g1782 105 Gene3D - 1 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1782 Vra-Chr1 33905321 33906097 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1782 - - var:108345183 160.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g1782 1 33905321 33906097 Vra1g1782 1 33905321 33906097 ECH