Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1726 ATGAAAGACACCATTGTTCTGTACCCCAACATTGGTAGGGGTCACCTAGTGCCGATGGTGGAGCTAGGAAAGCTCATTCTATCCCACCACCCTTCTCTTTCCATCACCATCCTCATCCTCACCCCATCCCCCAACGCCACTTTCACCCTAGCCTGCAACTCCAACGCCCAATACATCGCCGCCGTCTCCGCCACCATCCCCGCCATCACCTTTCACAGCGTTCCAATGGCCCAACTCCCCCTCAACAGCCCTTCCCTCCCCCCTCACCTCATCTCCCTTGAACTCTCCCGCCACAGCACCCAAAACGTTTCCCTTGCACTCCAAAGCCTCGTCAAAGCCTCCAACATCAAGGCCCTAGTCATGGACTTCTTAAACTTTAGCAACCCCAAAACTCTCACTGAAAATCTCACCACAGACATCCCCACTTTCTTCTACTATACATCCGCAGCCTCCAGCCTCATTGTGCTTTTTCATTTCTACGCCACTCTCCCAAAACAAATCAAAGATCAACAGTTTCTACTTCACTGCCCAGGGTTGCCTGCTATCTCCATGGATGACTTTCCAATCGAATCCCTCGACCCTTTGAACTACACTAACCAGATTTTCTCTCAGATAGCGGAAGCCATGAAGGGTAGTTCTGGGATTATAATAAACACTTGTGAAGCGATTGAAGAGAAAGCCATTGCAGTGTTGAACGACGATGGGACCGTGCCTCCGTTGTTTTGTGTGGGCCCCGTGATTTCTGCATCATATGGGGAAGAAGACAAAGGATGTCTGAGTTGGCTCGAGTCCCAACCGAGTCAGAGCGTGGTGTTGTTGTGTTTCGGAAGCATGGGGTGGTTCTCGAGGGAGCAGTTGAAGGAGATGGCTATTGGGTTAGAGAAGAGCCAGCAAAGGTTCTTGTGGGTGGTGAGGACTGAGTTGGAATGTGGTGACTCGGTGGAGGAGAAACCGAGTCTGGACGAGTTGTTGCCAGAAGGATTTTTGGATAGGACGAAGGAGAAGGGGTTGGTGGTGCGGGACTGGGTCCCACAGAGGGAGATTCTGAGTCATGACTCAGTGGGGGGGTTTGTGACTCACTGCGGGTGGAACTCGGTGCTGGAAGCCGTGTGCGAAGGGGTGCCAATGGTGGCGTGGCCATTGTACGCCGAGCAGAAGCTGAATAGGGTGTTTATGGTTCAGGAAATGAAGGTTGCTTTGGCGCTGAAGGAGGAGAAAGATGGGTCAGTGAGTGGGAGTGAGTTGGGGGAGCGAGTGAGGGAACTCATGGAATCTGACACGGGGAAAGAAATTCGTCAGAAGGTTTTCAAGATGAAACTCAGTGCTGCAGAAGCATTGAATGAAGGTGGAACTTCACGTGTTGCGTTGGATAAGTTGGCCATGTCATGGAGAAGTGTAATATAG 1404 0.515 MKDTIVLYPNIGRGHLVPMVELGKLILSHHPSLSITILILTPSPNATFTLACNSNAQYIAAVSATIPAITFHSVPMAQLPLNSPSLPPHLISLELSRHSTQNVSLALQSLVKASNIKALVMDFLNFSNPKTLTENLTTDIPTFFYYTSAASSLIVLFHFYATLPKQIKDQQFLLHCPGLPAISMDDFPIESLDPLNYTNQIFSQIAEAMKGSSGIIINTCEAIEEKAIAVLNDDGTVPPLFCVGPVISASYGEEDKGCLSWLESQPSQSVVLLCFGSMGWFSREQLKEMAIGLEKSQQRFLWVVRTELECGDSVEEKPSLDELLPEGFLDRTKEKGLVVRDWVPQREILSHDSVGGFVTHCGWNSVLEAVCEGVPMVAWPLYAEQKLNRVFMVQEMKVALALKEEKDGSVSGSELGERVRELMESDTGKEIRQKVFKMKLSAAEALNEGGTSRVALDKLAMSWRSVI* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1726 467 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 257 427 IPR002213 GO:0008194
Vra1g1726 467 ProSitePatterns UDP-glycosyltransferases signature. 342 385 IPR035595 -
Vra1g1726 467 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 459 - -
Vra1g1726 467 CDD GT1_Gtf-like 5 445 IPR002213 GO:0008194
Vra1g1726 467 PANTHER ISOFLAVONE 7-O-GLUCOSYLTRANSFERASE 1 1 465 - -
Vra1g1726 467 Gene3D Glycogen Phosphorylase B; 255 447 - -
Vra1g1726 467 Gene3D Glycogen Phosphorylase B; 5 453 - -
Vra1g1726 467 PANTHER GLYCOSYLTRANSFERASE 1 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1726 Vra-Chr1 32466050 32467686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1726 2 463 Glycosyltransferase AT3G16520 44.583 5.40e-115 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1726 - K13263 gmx:100777343 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g1726 1 32466050 32467686 Vra1g1726 1 32466050 32467686 ECH