Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1446 ATGGGTGTGATTGATTTCTACAACTCAGCTGCTTTGTGCTGGGTAAAGTCCAATACAAATCTGAAGCAGCAAGTGGGGTTACCTCCAAAACCCATTTGTTCATTTAAGGGGAATCAGAGGAAGTTTGTGGCAATGGCTTCTACCATTCCTGTGGAGCAAGTCAACAATGGTCCTCTGCAGGTGACAGGTGACTCCTTCATCAGAGAGCATCTGAGGAAGTTGTCTCCTTATCAGCCAATTTTGCCCTTTGAGGTTTTATCTGCTCGTCTTGGACGGAAGCCTGAGGATATTGTCAAGTTAGATGCTAATGAAAACCCTTATGGTCCCCCTCCAGAGGTTATGGAAGCCCTAGGATCCATAAAGTTCCCATATGTCTATCCTGATCCAGAGAGCCGCAGATTGCGTGCAGCCCTTGCCGAAGATTCTGGACTTGAAGCTGAATATATTCTTGNGGGATGTGGTGCAGATGAGCTTATTGATTTGATAATGCGTTGTGTGCTTGATCCTGGGGACAAGATTGTGGACTGTCCTCCAACCTTCACAATGTATGAATTTGANGCTGCAGTAAATGGAGCACTTGTTATCAAAGTTCCAAGGAAGCCAGACTTCAGCTTGAATGTTGAACAGATCACAGAAGTTGTTAAACAAGAAAAGCCCAAATGCATATTTTTGACATCTCCAAATAATCCAGATGGGAGTATAATTGATGATGATGTTCTCTTAAAAATACTTGACCTTCCCGTATTGGTGATATTGGATGAAGCATACATTGAGTTTTCAGCAATTGAATCGAGGATGAGTTGGGTGAAGAAACATGAGAATTTGATTGTTCTTCGGACATTTAGCAAAAGAGCTGGTTTAGCTGGACTTCGAGTAGGATACGGAGCTTTTCCTTTGAGTATAATTGAGTAGAGGACCTCGCACAAATGGGTGTGATGATTCGTCACTACGACAAGAAAGAGCTGAAAGGGTACGTTCGTGTAACTGTTGGTAAGCCTGAACAAACAAATGCACTTATGAAGTGTCTCAAGAAATTGTCGTAG 1043 0.4267 MGVIDFYNSAALCWVKSNTNLKQQVGLPPKPICSFKGNQRKFVAMASTIPVEQVNNGPLQVTGDSFIREHLRKLSPYQPILPFEVLSARLGRKPEDIVKLDANENPYGPPPEVMEALGSIKFPYVYPDPESRRLRAALAEDSGLEAEYILXGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFXAAVNGALVIKVPRKPDFSLNVEQITEVVKQEKPKCIFLTSPNNPDGSIIDDDVLLKILDLPVLVILDEAYIEFSAIESRMSWVKKHENLIVLRTFSKRAGLAGLRVGYGAFPLSIIE*RTSHKWV**FVTTTRKS*KGTFV*LLVSLNKQMHL*SVSRNCR 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1446 341 PANTHER HISTIDINOL-PHOSPHATE AMINOTRANSFERASE 45 304 - -
Vra1g1446 341 Pfam Aminotransferase class I and II 96 298 IPR004839 GO:0009058|GO:0030170
Vra1g1446 341 Gene3D - 126 316 IPR015421 GO:0003824
Vra1g1446 341 PANTHER HISTIDINOL-PHOSPHATE AMINOTRANSFERASE-RELATED 45 304 - -
Vra1g1446 341 SUPERFAMILY PLP-dependent transferases 65 307 IPR015424 -
Vra1g1446 341 CDD AAT_like 98 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1446 Vra-Chr1 22276377 22284292 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1446 K00817 - gmx:100784293 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g1446 1 22276377 22284292 Vra1g1446 1 22276377 22284292 ECH