Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1170 ATGCAACGGTTCAGCAACACAGTGATCGGATTCTTGAACTTTTTCAGCCTCTTGGCATCAATACCCATCATCGGGGCAGGTCTATGGATGGCAAGGAGCAGCACAAGTTGTGAAAATTTTTTCCAAACCCCACTGTTGGTGATAGGGTTTGTGGTGCTTGTGATTTCCCTAGCTGGTTTCATAGGGGCATGCTTCCATGTGGCATGGGCATTGTGGCTGTACTTGTTCATCATGGTCTTCCTCATTGCTTCCCTGTTTGCTTTGACCATATTTGGGTTTGTTGTGACTGAGCAGGGTGGGGGAGTGGAAGTTCCTGCTAGGGCTTACAAGGAGTACCATCTTCAACGTTATTCACCATGGCTCAGGAATAGGATCAAGGATTCTCAGTACTGGAGCACCATTAGAAGCTGTATTATTTCCTCCAACACATGTTCCAAGCTTTCCGTTTGGACCCCTCTTGATTACATGCAGAGGGATATGTCCCCCATTCAGTCCGGGTGTTGCAAACCACCAACAGCGTGCAGTTACAACGAGGAAAGTGTTACAATAACGCAAGATCCGGATTGCTACCGTTGGAACAACGCCCCCACTCTGCTTTGCTACGATTGCGAGTCTTGCATGGCCGGTGTGCTGGAAAACATTAGAAGGGACTGGCACAACATCTCTGTTCTTAACGTTGTCGTTCTTGTCTTTCTCATAGGGATTTATTCCATTGCCTGTTGTGCTTTCAGAAACGCCAGAAGAGCTCAAACTGATTATCCACATGGTCACAACCGCATGACCAAAGTTAAACCCAGATGGGATTACTATTGTTGGAGATGGTGGTATAACAAGAAGGAGGAGCTTTTTTGA 852 0.4671 MQRFSNTVIGFLNFFSLLASIPIIGAGLWMARSSTSCENFFQTPLLVIGFVVLVISLAGFIGACFHVAWALWLYLFIMVFLIASLFALTIFGFVVTEQGGGVEVPARAYKEYHLQRYSPWLRNRIKDSQYWSTIRSCIISSNTCSKLSVWTPLDYMQRDMSPIQSGCCKPPTACSYNEESVTITQDPDCYRWNNAPTLLCYDCESCMAGVLENIRRDWHNISVLNVVVLVFLIGIYSIACCAFRNARRAQTDYPHGHNRMTKVKPRWDYYCWRWWYNKKEELF* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1170 283 PANTHER TETRASPANIN-8-RELATED 1 275 IPR044991 GO:0009734|GO:0016021
Vra1g1170 283 PANTHER TETRASPANIN/PERIPHERIN-RELATED 1 275 - -
Vra1g1170 283 Pfam Tetraspanin family 6 242 IPR018499 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1170 Vra-Chr1 15042494 15045546 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1170 1 283 Miscellaneous Gene Families AT3G12090 64.437 1.58e-126 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1170 - - gmx:100810507 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g1170 1 15042494 15045546 Vra1g1170 1 15042494 15045546 ECH