Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1112 ATGGGAGGTGTCACATCATCCATGGCTTCCAAGTTGGCCTTCTTCCCACCCAACCCAGCATCGTACAAGGTTGTCAAGGACGAGCTAACGGGTCTTCTGCTCCTCAGTCCCTTCCCTCACCGCGAGAACGTCGAAATTCTTAAGCTTTCCACGCGCCGTGGAACTCAGATACTCACCATGTACGTTCGCCACCCCATGGCCTCTTCCACTCTTCTCTACTCCCACGGCAACGCCACCGATCTTGGCCAGATGTATGACCTTTTCATCAACCTCACCATCCACCTACGTGTTAATCTCATTGGGTATGACTACTCTGGGTATGGTCAATCATCAGGGAAGCCAAGTGAGCAGAATACATATGCAGATATTGAGGCTGTGTACAAATGTCTAGAAGAAACCTATGGTACCAAGCAAGAGGATATAATCTTGTATGGCCAATCTGTTGGCAGTGGCCCTACTTTGGATCTTGCAACTAAATTGCCACATTTGAGAGCTGTTGTTCTGCACAGTCCTATACTTTCAGGCTTGAGGGTCATGTATCCAGTGAAACGCAGTTACTGGTTTGACATATACAAGAATATCGACAAAATTCCATTGGTTAATTGTCCTGTTCTTATAATTCATGGGACTTCAGATGAAGTGGTAGATTGCTCCCACGGAAAACAACTGTGGGAACTGTGTAAGGAGAAGTATGAGCCACTATGGCTACAAGGAGGTAACCACTGTGATTTGGAGCAATTTCCTGAGTATATCAGGCATCTGAAGAAGTTCATATCCACTGTTGAGAAGTCTCCATCACAAAGATACAGCTTCAGAAGAAGCATGGAGCAGTTTGAGCAGCCCCGAAAGAGCACTGATGTATTTGATGTCAGTAGAAAGAGCACTGACCGCAGGGAAAAACCACGGCTGAGCACAGACAGGCCTGAAAAACTGAAGAACTTGTCCAATAATGCAGAAAAGTTAGAGAGACTACGGGTAACTTTTGATCACATAGAAAGGTCAAGAAGAAGTGTGGATTGTCTTGAGAAGTCTAGAAAAAGCATTGATCATCAACTTGAAAAGGCAAGGAAAAGTGTGGACAGGTTGGAAAGAATAAGGACCTGA 1104 0.4529 MGGVTSSMASKLAFFPPNPASYKVVKDELTGLLLLSPFPHRENVEILKLSTRRGTQILTMYVRHPMASSTLLYSHGNATDLGQMYDLFINLTIHLRVNLIGYDYSGYGQSSGKPSEQNTYADIEAVYKCLEETYGTKQEDIILYGQSVGSGPTLDLATKLPHLRAVVLHSPILSGLRVMYPVKRSYWFDIYKNIDKIPLVNCPVLIIHGTSDEVVDCSHGKQLWELCKEKYEPLWLQGGNHCDLEQFPEYIRHLKKFISTVEKSPSQRYSFRRSMEQFEQPRKSTDVFDVSRKSTDRREKPRLSTDRPEKLKNLSNNAEKLERLRVTFDHIERSRRSVDCLEKSRKSIDHQLEKARKSVDRLERIRT* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1112 367 MobiDBLite consensus disorder prediction 273 316 - -
Vra1g1112 367 PANTHER ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN 1 314 - -
Vra1g1112 367 PANTHER ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN 324 364 - -
Vra1g1112 367 Coils Coil 345 365 - -
Vra1g1112 367 Gene3D alpha/beta hydrolase 36 263 IPR029058 -
Vra1g1112 367 SUPERFAMILY alpha/beta-Hydrolases 34 262 IPR029058 -
Vra1g1112 367 Pfam Serine aminopeptidase, S33 71 174 IPR022742 -
Vra1g1112 367 MobiDBLite consensus disorder prediction 275 316 - -
Vra1g1112 367 PANTHER ALPHA/BETA-HYDROLASE SUPERFAMILY PROTEIN 324 364 - -
Vra1g1112 367 PANTHER ALPHA/BETA-HYDROLASE SUPERFAMILY PROTEIN 1 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1112 Vra-Chr1 13727512 13731241 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1112 K01076 - gmx:100795346 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g1112 1 13727512 13731241 Vra1g1112 1 13727512 13731241 ECH