Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0951 ATGATGAAGATGAAGAATAGTTATAGTAGTAATAACCAAAAGACAAATGGTCTTGCTTCCATCATGAAAGAAGGTTCAGATGGTGGCAGAGTTGAGTCCGGTTCAAAGGAATGGGAGATGAGACCAGGCGGAATGCTGGTTCAGATGAGAACCACCGAGTCGGATCGGAACTCAGTGCTTGTTCCCTCCATTAGAGTTAGGGTCAAGTATGGTTCAATTTACCATGAAGTCAACATTAGTTCCCAAGCTACATTTGGGGAGTTGAAGAAGATGCTATCAGGGATAACTGGATTACACCATGAAGACCAAAAGCTGTTTTACAAAGACAAGGAAAGGGATTCAAAGGCCTTTCTTGACATGGTTGGGGTGAAGGATAAATCCAAGATAGTGCTGGTTGAAGACCCTATTAGTCAAGAGAAGAGGTTGTTAGAGAGAAGGAAGAATGCTAAGATGGAGAAAGCTGCAAAATCAATCTCAGAAATCAGCTTGGAAGTAGATAGGCTTGCAGGGAGGGTATCAGCATTTGAGTCAATTATCAACAAAGGTGGAAGATTTGCAGAAACAGATGTGCTTAATCTGATTGAGTTATTGATGAATCAATTGCTGAAACTGGATGGTATAATGGCTGAAGGGGATGTGAAATTAAAGAGGAAAATTCAGGTAAAAAGAGTTCAAAAGTATGTTGAAACTCTGGATTTGCTGAAGATTAAGAATTCCTTGCCTGGTAGCAATGGACACCATGCACCAGTGCAGCATCAACAGAAGCATTCAAATGGTCAAAAACTGGGACCAGTTTTGGAGCAACAAGAAAAGCACTCAAATGGACATAACAGATTAGCCTTAGCACCAATTCAGGAACAGCAACAACAAAAACAACCAAGGAACTCAAATGAAAATTTCCTAGAACTTTACCATGAAGAACAACATCAACCCTCAAGGAATTCCACCTCAGGAGTTGTAGTTACCACAAATTGGGAACTGTTTGATTTTGCCCCACCATTAATCCCTGTTCAATCCACATCCCCTCCCCCACCACCCCCAATGGCCAATAGTTCAGGCCCTCCCAAGTTCAATTGGGAACTCTTCAACTAA 1092 0.4158 MMKMKNSYSSNNQKTNGLASIMKEGSDGGRVESGSKEWEMRPGGMLVQMRTTESDRNSVLVPSIRVRVKYGSIYHEVNISSQATFGELKKMLSGITGLHHEDQKLFYKDKERDSKAFLDMVGVKDKSKIVLVEDPISQEKRLLERRKNAKMEKAAKSISEISLEVDRLAGRVSAFESIINKGGRFAETDVLNLIELLMNQLLKLDGIMAEGDVKLKRKIQVKRVQKYVETLDLLKIKNSLPGSNGHHAPVQHQQKHSNGQKLGPVLEQQEKHSNGHNRLALAPIQEQQQQKQPRNSNENFLELYHEEQHQPSRNSTSGVVVTTNWELFDFAPPLIPVQSTSPPPPPPMANSSGPPKFNWELFN* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0951 363 Pfam BAG domain 158 233 IPR003103 GO:0051087
Vra1g0951 363 MobiDBLite consensus disorder prediction 1 20 - -
Vra1g0951 363 SUPERFAMILY Ubiquitin-like 54 138 IPR029071 -
Vra1g0951 363 MobiDBLite consensus disorder prediction 1 37 - -
Vra1g0951 363 Pfam Ubiquitin family 74 132 IPR000626 GO:0005515
Vra1g0951 363 ProSiteProfiles Ubiquitin domain profile. 62 132 IPR000626 GO:0005515
Vra1g0951 363 MobiDBLite consensus disorder prediction 336 363 - -
Vra1g0951 363 MobiDBLite consensus disorder prediction 244 259 - -
Vra1g0951 363 ProSiteProfiles BAG domain profile. 157 235 IPR003103 GO:0051087
Vra1g0951 363 PANTHER BCL2-ASSOCIATED ATHANOGENE 1 344 IPR039773 GO:0051087
Vra1g0951 363 CDD Ubl_AtBAG1_like 63 132 - -
Vra1g0951 363 Gene3D BAG domain 134 239 IPR036533 GO:0051087
Vra1g0951 363 SUPERFAMILY BAG domain 117 239 IPR036533 GO:0051087
Vra1g0951 363 SMART BAG_1 157 235 IPR003103 GO:0051087
Vra1g0951 363 Gene3D - 63 133 - -
Vra1g0951 363 PANTHER BAG FAMILY MOLECULAR CHAPERONE REGULATOR 3 1 344 - -
Vra1g0951 363 MobiDBLite consensus disorder prediction 239 259 - -
Vra1g0951 363 MobiDBLite consensus disorder prediction 336 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0951 Vra-Chr1 11261752 11264057 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0951 - - vun:114181975 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0951 1 11261752 11264057 Vra1g0951 1 11261752 11264057 ECH