Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0938 ATGCCGACCCTTGATGAGGCCTCACAAAAGTGCCCTCAATGCTGTTGCAGCTGCACAACCCCGTTTTTCAACTCTACAATTTCATCACGCAACACAACAGCAAAACTCAGGAACAGTTCTGCAGAGTGGCGCCACAGTTTTGCAGTCACAACAACATCATCTATATTCCCAAACACTCAATTCACAAACCATGAGTCTCTTCCATCACTTCATGAATCATTCAATGAGTTCAGCAAAGTGTTCCCTCAGTATTCTGATACTGAACAAGTTGACTATGTTAGAGCCAAGGACTATTTCCACCTGTCACTCTCCAGCCAAACTTGCCTTGATTACATTGGCATTGGCCTTTTCTCTTGCTCTCAGCTTCAACACCCTGACTCATCAAAAGGTCAATTACCCTCTTCTTCAGTTCCTCAAACACCCCAATTTCAACCTAACTGCTCAGATGCTCCTTTCTTTAGCATACACTCCAAAACTGGTAGCTTAAAGACTTTGTTGCTTCATGGGGGACAAGACTCAGAATTTGAGGGTGCAATGAGAAAGAGAATCATGAGCTTCCTTAACATATCAGAAAATGACTACTTTATTGTTTTCACAGCAAACAGAACCTCGGCTTTCAAACTTGTGGCAGATTCATACCAATTCCAAACTAGTAGGAGGCTTCTGACAGTTTATGACTATGAGAGCGAGGCGGCGGAAGCAATGATTAGTTCCTCAGAGAAGAGAGGTGCCAGGGCCATGTCAGCAGAGTTCTCATGGCCTAGGCTGAGGATTCAGTCAAAAAAGTTGAGGAAGATGATTGAGAGTAGGAGAAAGAAGAAGAAAAGAAAAGGCCTTTTTGTTTTCCCACTTGGTTCAAGAGTGACAGGAGCAAGATATCCTTATCTGTGGATGAGCATAGCACAGGAGAATGGATGGCATGTGTTGGTTGATGCATGTGCATTGGGGCCAAAAGACATGGACTGCTTCGGCCTCTCTCTATTTCAACCAGATTTTCTTATTTGCTCTTTCTATAAGGTCTTTGGGGCAAACCCTTCTGGATTTGGATGCCTTTTCATCAAGAAATCTGCCATTTCCAGCTTGGAATCTTCCCCTTCAGCAGGAATTGTGAGCCTTGTACAAGAAAAGCAGCCTCGTCAATTATCAGATTATTCTTCTGCCACTGACTTAGAACTTATACACAATACAACATCAACATCCCCACATGAAGAGAAACCATTTCCTTTGTCATCTTTATCGGGCCCAATGCAAACTAAACAATCTGAAATAGTTGAAGAAGGAGAAGCAACTGACTCAAATCTAAAAGCTTCTCAAGGTTCTGAAATTGAGGAGATACAAGAGCCAGTTCAGACCCTTAAGAAAAGTAATGTCCAAGAAAGTGGCATCCAATGTGGGTGCTTAGACCAAGTTGATTCTTTGGGATTGATTCTCATCACTAACAGGTCAAGGTACCTTATCAACTGGCTGGTAAACTCTATGTTGAAGCTTAAGCATCCTAACACACAAGGGGTTCCTTTGGTCAAGATTTATGGTCCAAAGGTGAAATTTGACAGAGGGCCAGCTTTGGCATTCAATATATTTGATTGGAAAGGTGAAAGAGTTGAGCCTGCACTTGTCCAGAAACTTGCTGATAGAAGCAACATCTCTATCAGTTATGCATTCCTGCAGCATATTTGGTTTGCAGATAAGTATGCAGAAGAGAAGGGAAAAGTCCTACAAACCAACAAGAAGAAAGAAAGGGTTGGAATCACTGTGGTTACTGCTGCACTTGGCTTCCTTGCTAATTTTGAAGATGTGTATAAGCTTTGGGCTTTTGTTGCTAGATTCCTAGATGCTGATTTTGTGGAGAAAGAGAGGTGGAGATATCTTGCCATCAACCAAAAAACAATTGAGCTTTAG 1899 0.4218 MPTLDEASQKCPQCCCSCTTPFFNSTISSRNTTAKLRNSSAEWRHSFAVTTTSSIFPNTQFTNHESLPSLHESFNEFSKVFPQYSDTEQVDYVRAKDYFHLSLSSQTCLDYIGIGLFSCSQLQHPDSSKGQLPSSSVPQTPQFQPNCSDAPFFSIHSKTGSLKTLLLHGGQDSEFEGAMRKRIMSFLNISENDYFIVFTANRTSAFKLVADSYQFQTSRRLLTVYDYESEAAEAMISSSEKRGARAMSAEFSWPRLRIQSKKLRKMIESRRKKKKRKGLFVFPLGSRVTGARYPYLWMSIAQENGWHVLVDACALGPKDMDCFGLSLFQPDFLICSFYKVFGANPSGFGCLFIKKSAISSLESSPSAGIVSLVQEKQPRQLSDYSSATDLELIHNTTSTSPHEEKPFPLSSLSGPMQTKQSEIVEEGEATDSNLKASQGSEIEEIQEPVQTLKKSNVQESGIQCGCLDQVDSLGLILITNRSRYLINWLVNSMLKLKHPNTQGVPLVKIYGPKVKFDRGPALAFNIFDWKGERVEPALVQKLADRSNISISYAFLQHIWFADKYAEEKGKVLQTNKKKERVGITVVTAALGFLANFEDVYKLWAFVARFLDADFVEKERWRYLAINQKTIEL* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0938 632 Gene3D - 168 392 IPR015421 GO:0003824
Vra1g0938 632 PANTHER MOLYBDENUM COFACTOR SULFURASE 8 632 - -
Vra1g0938 632 MobiDBLite consensus disorder prediction 396 420 - -
Vra1g0938 632 MobiDBLite consensus disorder prediction 396 441 - -
Vra1g0938 632 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 8 632 - -
Vra1g0938 632 SUPERFAMILY PLP-dependent transferases 178 366 IPR015424 -
Vra1g0938 632 Pfam Aminotransferase class-V 179 370 IPR000192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0938 Vra-Chr1 10993570 10995890 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0938 - - gmx:100790494 1068.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0938 1 10993570 10995890 Vra8g2281 8 41086705 41089100 PCT