Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0917 ATGATGAAGCAGGTTCTTCTTTTCTTCTGCTTTGCCTCTGCATTATCCCTTTCAGTCTCAGAATCCAAATCTAATTCTCTTCAAAATCCTGCAATCGATTCCTTCTCTTTTGGCTATATTCAGACGAAGACTCCACAGAACTGTTCTTACCTTGTAATTATATCTACAAGTTGTTCATCACCCAAGTTCACATGGGAGAAGATCGGAATTGCTTTTGGAGATGCTCATGGCAACGAGAAGAAAATGATGAAGCAGGTTCTTCTTTTCTTCTGCTTTGCCTCTGCATTATCCCTTTCAGTCTCAGAATCCAAATCTAATTCTCTTCTAAATCCTGCTATCGATTCCTTCTCTTTTGGCTATATTCAGGTATACAAAGAAAGATTAGATGGTCCAGGCACATTCGAGCAATGTTCTTTAGATGTATTTGAGATAAATGGGGCATGTTTATCCGATATTTGTTTTCTGTGGCTATATAGATCTGGTGCAGTAGATGATTGGAAACCTGAATCAGTGAAAATCTCCTGCAACAATGCATGTTTTCCCATCTTCAACATACACTTCAATATAAACTTCTCCCTCCCTGACGCTGCCTGGTATGGCTATAAATGGTGTAATAGTGATCCACCATATCTGGCAAATGGCTTTCCCTTCCCAACTGGTGTTGTTTTCTTTTAA 675 0.3911 MMKQVLLFFCFASALSLSVSESKSNSLQNPAIDSFSFGYIQTKTPQNCSYLVIISTSCSSPKFTWEKIGIAFGDAHGNEKKMMKQVLLFFCFASALSLSVSESKSNSLLNPAIDSFSFGYIQVYKERLDGPGTFEQCSLDVFEINGACLSDICFLWLYRSGAVDDWKPESVKISCNNACFPIFNIHFNINFSLPDAAWYGYKWCNSDPPYLANGFPFPTGVVFF* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0917 224 PANTHER - 122 209 - -
Vra1g0917 224 PANTHER - 83 123 - -
Vra1g0917 224 PANTHER - 2 79 - -
Vra1g0917 224 Pfam Embryo-specific protein 3, (ATS3) 41 204 IPR010417 -
Vra1g0917 224 PANTHER EMBRYO-SPECIFIC PROTEIN 2 79 - -
Vra1g0917 224 PANTHER EMBRYO-SPECIFIC PROTEIN 83 123 - -
Vra1g0917 224 PANTHER EMBRYO-SPECIFIC PROTEIN 122 209 - -
Vra1g0917 224 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 45 191 IPR036392 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0917 Vra-Chr1 10672576 10678859 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0917 - - vra:106774673 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0917 1 10672576 10678859 Vra1g0917 1 10672576 10678859 ECH