Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0898 ATGGGAAACACGTTCTGTTTATTCTGTGGATGCGTTGCTCAATCGAGCGTCGGCGTCGTCGAACAGTGGGGTCGCTTCCACCGCCTCGCGCAACCCGGTTGCCACTTTTTCAACCCTCTCGCCGGCGAATGCCTCGCCGGAATCCTCTCCACCAGAATCTCCTCCCTCGACGTCCGCATCGAGACCAAAACCAAGGACAATGTGTTTGTGCAATTGCTGTGTTCAATTCAGTACCGAGTGATTAAGGAAAACGCGGACGATGCTTTCTATGAATTGCAGAATCCTCAGGAGCAGATCCAGGCTTATGTTTTCGATGTGACACGTGCTATTGTTCCGAGAATGAACTTGGATGAGCTCTTTGAGCAGAAGGGCGAGGTTGCTAGAGCTGTCTTGGAGGAACTTGAAAAGGTGATGGGAGAGTATGGGTATAATATAGAGCACATACTCATGGTTGATATTATACCCGATCCTTCTGTGCGTAAGGCAATGAATGAGATCAATGCAGCTCAAAGGATGCAACTTGCAAGTGAGTACAAAGGAGAAGCTGAAAAGATATTGCTAGTTAAAAAGGCAGAAGCTGAAGCTGAGGCCAAGTATTTGGGCGGGGTTGGTGTGGCTAGGCAACGGCAAGCTATTACAGATGGCTTGAGAGAGAACATCCTGAATTTCTCTCACAAAGTAGAAGGCACTAATGCTAAGGAGGTGATGGATCTTATCATGATAACTCAGTACTTTGACACAATCAAAGACCTTGGGAACTCATCAAAGAATACCACTGTTTTTATACCCCACGGACCTGGCCATGTTAGGGATGTTGGAGAGCAGATACGCAACGGACTGATGGAAGCAGCCAGTGCTCAAGTAAATGTGGAGGAGTGA 879 0.4767 MGNTFCLFCGCVAQSSVGVVEQWGRFHRLAQPGCHFFNPLAGECLAGILSTRISSLDVRIETKTKDNVFVQLLCSIQYRVIKENADDAFYELQNPQEQIQAYVFDVTRAIVPRMNLDELFEQKGEVARAVLEELEKVMGEYGYNIEHILMVDIIPDPSVRKAMNEINAAQRMQLASEYKGEAEKILLVKKAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGTNAKEVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHVRDVGEQIRNGLMEAASAQVNVEE* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0898 292 PANTHER HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 4 1 288 - -
Vra1g0898 292 SUPERFAMILY Band 7/SPFH domain 48 172 IPR036013 -
Vra1g0898 292 CDD SPFH_like_u4 11 280 - -
Vra1g0898 292 SMART PHB_4 7 167 IPR001107 -
Vra1g0898 292 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 1 288 - -
Vra1g0898 292 Gene3D Band 7 domain 46 169 IPR036013 -
Vra1g0898 292 Pfam SPFH domain / Band 7 family 14 183 IPR001107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0898 Vra-Chr1 10443872 10447139 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0898 - - gmx:100788194 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0898 1 10443872 10447139 Vra1g0898 1 10443872 10447139 ECH