Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0862 ATGGGGTTGAGATTGAACCAAACATTCTACGTTTCGCATGGATCACCAGCTCTGGCCGTAGATGATTCGATTCCGGCGAGGAAGTTCTTCACTTCCTGGAAAGAGCGGTTTCCGACGCCACCCTCCGCCATTCTCGTCGTCTCCGCCCACTGGGACACTCATGTTCCCACCGTCAACGTCGTTGACCGAAACGATACCATCTACGACTTCTATGGCTTCCCTGAATCCATGTATAAGTTGAAGTATCCAGCACCTGGGGCACCAGAGTTGGCGAAGAGGGTGAAGGAGCTTCTGATAGGATCAGGGTTTGAGCATGTGAAGGAAGACATGAACCGTGGGCTTGACCATGGTGCATGGGTGCCACTGTTGTTGATGTACCCTGAAGCAGACATACCAGTGTGTCAACTTTCACTTTCATCTAACAAAGGGACCACTTACCACTATAACATGGGAAAGGCTTTGGCTCCTCTCAAAGATCAAGGTGTTCTTATCATTGGGTCTGGGAGTGCCACCCATAACCTCAAAGCAATGGGCCCTCGTAATAGCCCACCTGCTCCATGGGCTCAGGCTTTTATGACCTGGCTCAAAACCTCTCTTCTTGAGGGAAGGTACGAGGAAGTGAATGAATACGAAGAGAAAGCTCCATATGCAAAAATGGTTCATCCCAGGTCAGATCACTTCTTGCCACTGCATGTAGCCATGGGAGCTGCTGGTGAAAATGCAAAGGCCAAAGTTATTCATGATAGTTGGGATGTTGGTTCTATTTCTTGTGCTTCTTTCAGTTTTACAGCTGCTAACGCTTAA 804 0.4876 MGLRLNQTFYVSHGSPALAVDDSIPARKFFTSWKERFPTPPSAILVVSAHWDTHVPTVNVVDRNDTIYDFYGFPESMYKLKYPAPGAPELAKRVKELLIGSGFEHVKEDMNRGLDHGAWVPLLLMYPEADIPVCQLSLSSNKGTTYHYNMGKALAPLKDQGVLIIGSGSATHNLKAMGPRNSPPAPWAQAFMTWLKTSLLEGRYEEVNEYEEKAPYAKMVHPRSDHFLPLHVAMGAAGENAKAKVIHDSWDVGSISCASFSFTAANA* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0862 267 CDD 45_DOPA_Dioxygenase 8 262 IPR014436 GO:0008270|GO:0016701
Vra1g0862 267 Gene3D - 4 263 - -
Vra1g0862 267 Pfam Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 262 IPR004183 GO:0006725|GO:0008198|GO:0016491
Vra1g0862 267 PANTHER AROMATIC RING-OPENING DIOXYGENASE, CATALYTIC PROTEIN 4 266 - -
Vra1g0862 267 PANTHER UNCHARACTERIZED 4 266 - -
Vra1g0862 267 PIRSF Doxgns_DODA 1 264 IPR014436 GO:0008270|GO:0016701
Vra1g0862 267 SUPERFAMILY LigB-like 8 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0862 Vra-Chr1 10116011 10117951 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0862 K15777 - gmx:100797161 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0862 1 10116011 10117951 Vra1g0862 1 10116011 10117951 ECH