Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0803 ATGACTTTGGTGCACATGGGTACACAGATTCCATCCCCGGCTTATATAAATGTAAATCTCACCCTTCTTTCATATCCATCTCATAAGAGTTACAAGAAGAAAAAAATTAAACACAGAAAAATGAAGATGACAGTGGTAGCATTGATACTAGTGGTTGCCTTAAGCACAAAGGCATTACTTGGGGAAGCAGGTGCTGCAGCAGAGCAAATTGTGGACACATCAGGGAAGAAGGTGCGAGCTGGTGACTATTATTATATTGTTCCAGCATCCTCTGATGTAGCTGGTCTTAATCTCTCAACCACAGGTCAAGATTGCCCTCTTGATCTTGTAGTTGTTGATGGTTACCAAGGCCTCCAATTTATGTTTCTACCTGTTAATGAAAAGAAAGGTGTGATTCGCGTTTCCACTGATCTCAACATTTTATTCGCCACCTACACAGGTTGTCCAGATTCCACTGTGTGGAAGCTTAAGGACTATGATTATTCAACATCACTGTGGTTTGTCACAACTGGTGGCGCTTTGGGCAATCCTGGCCCTCAAACCATCCAAAGTTGGTTCAAGATTGAGAAGTACGAGGATGCTTACAAGATGGTTTATTGTCCAAGTGTGTGCAATTATTGCAATTATCCATGCAGTGATATTGGAATATATCAGGACCAATATGGCAAGCGTTTGGCTCTAACTTCTGAGCCATACAAGGTGCAGTTCCAGAAGGTTCAATACTAA 726 0.4174 MTLVHMGTQIPSPAYINVNLTLLSYPSHKSYKKKKIKHRKMKMTVVALILVVALSTKALLGEAGAAAEQIVDTSGKKVRAGDYYYIVPASSDVAGLNLSTTGQDCPLDLVVVDGYQGLQFMFLPVNEKKGVIRVSTDLNILFATYTGCPDSTVWKLKDYDYSTSLWFVTTGGALGNPGPQTIQSWFKIEKYEDAYKMVYCPSVCNYCNYPCSDIGIYQDQYGKRLALTSEPYKVQFQKVQY* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0803 241 Pfam Trypsin and protease inhibitor 70 238 IPR002160 GO:0004866
Vra1g0803 241 PANTHER KUNITZ TRYPSIN INHIBITOR 2 41 238 IPR002160 GO:0004866
Vra1g0803 241 CDD STI 69 238 IPR002160 GO:0004866
Vra1g0803 241 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 69 98 IPR002160 GO:0004866
Vra1g0803 241 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 185 204 IPR002160 GO:0004866
Vra1g0803 241 SUPERFAMILY STI-like 66 239 IPR011065 -
Vra1g0803 241 SMART kul_2 69 240 IPR002160 GO:0004866
Vra1g0803 241 Gene3D - 65 241 - -
Vra1g0803 241 PANTHER LIPID TRANSFER PROTEIN 41 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0803 Vra-Chr1 9471906 9473038 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0803 - - vra:106757068 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0803 1 9471906 9473038 Vra1g0803 1 9471906 9473038 ECH