Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0792 ATGGCGAGGAAGATGCCTTGTGCCCCTCAAGAGATAGGTAATGATAATCCAAAAGTTTCAGAAGCAAGAAAGGATTCCGTATCAACAATATATCAACAACAACATAAATTCACATCTTTAGAGGGTTGTCAAGAATCATCTCTTTCAAGGATTAACTCGGATAGTAGGTGTGCCATCATTTCGTTCAACTTTGAGCCTGATGGAACCTGGAGAATTGTTGCCCTACCAGGGCAGTGTCTCAATTACATTAACTTAGCTGCTGGTGTAAATATGGATGGTGTGCAACTGCTTGTCTCTCCGCTTAATAGGTTGAGGATTGATCAATGTAAGGGCCCTAGAGTGCCTCTTCCTTCCTATGCTTATTCAGCTAAATCATGTACAAAAAAAAGCTTTACTAGTTCAAATGTGTATCGTCGATGTCAAAACAAGATTGCTAGCAGAGCTTCTAAACTCAACGAACTCTCTAACAAGTCCAGTTCTCAAAGCACATTAGTATGTAGCCCTGGTTTTTTCCCGGATAGTTCAGCAGAAGTTAATTCATCTGATAAGTACGCAAGTAATTCCAAGGACGATGACAAGTCTTTGAAGAAAAACTCAAGAAAACAAGGAAGAAAGAAATTTAGACGGAGTAAGAAGAAGTCAAGTCACAGGTCTACTGAATGTGAAGTTCCTACTGAGGAAGTTGTCTGTCCAAGTTTGACCTCTGAAACCTGCAGCAGCAATGTTGCGGATAAGGACGGCATGGCAGAATTTTTAACTTCTGATGATAGATTAATAAAATCTGATTGTGACAGAAATGGGATGAATGACATCAAAGTTATGGAAGCACCTAACGTTAGTAACTCTTATCTTGATCAGGAAGCGATGTTAAAGGATTCTGCACCTATTATTCCAAGTTCTGCAGCAGAATGTGCCACATTTGAATCCAAGAATCAGCTCAAAGGTAGGGGCCCTGAGGCAGTCATTGATAGAGAAATAAAGAACATCCAGCATACTCAGCCATGCAGTTTTAATGATATACAAGACTCTTTAGTGCTAGATTCAGTTTCAGTTTGTTCCAGAAGTGGTGGAAGTATAAATACAGATGATATAGGAAAACAGTCCAACAAGTCAAATTGCACAACTACTTCAGATTCTGGAGATGGATATGTTTTTTGTCAAAACTTGACGAATGGCATTCCCAATAACAATGAACATATTGAGGGGATTATGCACAGTGGTCAAAATTGCATCGGTAATGATAAGAGAGTTAAGCAAAAGAGAACTATGTCGCACTGTTCAGGTTTAAACAAATTTGGGGGTGTTGGAATTTTGCAAGGTCGAAAAGGGAAGGAAAACAGTCATTCTGTATGGCAAAAGGTTCAGAAGAATGCTTCTGATGAATGTGGCGGTGATTTGAAGAAAGTAAACACTACTTTGTCACAACTTGCTTCTGTTGTGGAAAAGGATCCCTCGGTTATCAAAGAATGTAAATCTGTTGGTGTGAACTGTGTATCAAAAACTGAGGATAAGAAACAAATGAAAAATAAAATTGGTAAGAAATCTAAAGTTAAAATGGACTCAGTATCAAAAAAGGGACAGAGCAATTATTCTAGGAAGAGTTTGCATCTTAACAGGTCTTTGTCAAATGATCATGGGAAGGTTGGTGCTGAACAGAATGATATGCTTCTTATCTCAACTCAGGAAATTGATCAGCATGGAGTGAATAATGACTCTGGATTTAATTCTGATGTTCACTGCTTGTTGGATGGGGTCCAGACCAATGGGGTTGAACAGGTAACATCTGAAAAAATTCACAGTGCAGAATTTCATCTGGAGGAGTCAGATCCAAGAAGTAGTGCCTGCCATACTGTTGCAAACACAAACAATGAAAGTATAGATAGTGAGGATAGGTCGTTAGTAAGGCCAAGTGAGAATGTCAATCAATCAAATATGTCTGTAGAGCTGTCTCCAGCGTCATGCAATCTTGAAGGTGATGAGGTTGGTCAAACAGAGAAAGAAGTTTCTTCTGCAGACTACAATGCACAAAACCAGTGCTCTGGAACCTCCCTCTGGAAATGGATACCAATTGGGAAAAAAGATACTGGGTTAGAAAAATATGAATCTAGTACTTTACCACCAGATTATTCTGATGCATCCTCTAGGAACAATATTAACCATGAAAGCAGTGTTGAACCAGAACTGGCCTCTTCTGAAAGTAAGGATTCTTCAATAAATGCAAGCAGAACATCAAATGGAGAGATTTACCACCATGTGTCCTGTCTAGGTGAGGGTGAGAACGAAAAATTGGGTGGGCAGGTTCCATTTACATTCACACAGCATAGGGACAAGAAAGAAGTTTCTAGTCACATGTTTAATGAAAGCAAAAAACAAGAAATGTTAGAAAAGGATTCTTACAGAATATCCCAAGCTGTGAATGATGCATGTAGGGTACAACTAGCTTGTGAAGCAGTGCACATGGCTACAGGTGGTCCAGTTGCAGAGTTTGAAAGACTACTTCATTTTGGTAGTCCTGTGATTTGTAAATCAGTTGATTCAGTCAGTTGTTCAACCTGCTCATGCAACCATGCTGGTGGTGTCTCACTGTGCAGACACGAGATCCCTAACCTATCTTTGGGATGTCTGTGGCAGTGGTATGAGAAACATGGGAGCTATGGATTAGAGATAAGTGCTCAGGATCATGAGAATCCAAAGAGACAAGGTGTTGGTGATTTTCCATTCCGTGCGTATTTTGTCCCTTCTTTATCAGCAGTTCAGCTGTTTAAGAACCATGAAGATCAATGTGTAAATAGCAGTGACAAGCTTTCAAATTGTGAGGTTTCAGAGCCTCGAAATCAGGATGCAAGCATTGAAACTCCGAAGGAGACGGATTCTATCAGTAATAGATCTGGTGATTTAGAACTTCTTTTTGAGTATTTTGAATGTGAGCAACCTCAACAAAGACAGCCACTTTATGAGAAGATACAAGAACTGGTTAGAGGAAATATGCCAATCCAATCTTCAACATATGGGGACCCAACAAAACTGGATTCAATAAAGCTGCGAGATCTTCACCCTAGCTCTTGGTTCTCAGTTGCATGGTATCCTATTTACCGCATACCAGATGGCAACTTTCGTGCATCTTTTCTGACTTATCATTCACTTGGACATTTGGTCCGTAGAAGAACAGGTTCAGATTTGTCAACATCAGGTTCTTGCATAGTATCTCCGGCTGTGGGTCTCCAAAGCTACAATGACCAGGGAGAATGCTGGTTCAAGCTGAAGCACTCAGCAGAAGCAGCAGAAATGGTGGGCTTAGACCCTTCTTTTGTCCTGAGAGAACGTTTGAAGACACTCGAGGAAACAGCATGTGTGATGGCAAGAGCTGTGGTGAAGAAGGGGAACCAAACATGTACTAACAGACATCCTGATTATGAGTTTTTCTTGTCTAGGCGACGGTATTGA 3444 0.403 MARKMPCAPQEIGNDNPKVSEARKDSVSTIYQQQHKFTSLEGCQESSLSRINSDSRCAIISFNFEPDGTWRIVALPGQCLNYINLAAGVNMDGVQLLVSPLNRLRIDQCKGPRVPLPSYAYSAKSCTKKSFTSSNVYRRCQNKIASRASKLNELSNKSSSQSTLVCSPGFFPDSSAEVNSSDKYASNSKDDDKSLKKNSRKQGRKKFRRSKKKSSHRSTECEVPTEEVVCPSLTSETCSSNVADKDGMAEFLTSDDRLIKSDCDRNGMNDIKVMEAPNVSNSYLDQEAMLKDSAPIIPSSAAECATFESKNQLKGRGPEAVIDREIKNIQHTQPCSFNDIQDSLVLDSVSVCSRSGGSINTDDIGKQSNKSNCTTTSDSGDGYVFCQNLTNGIPNNNEHIEGIMHSGQNCIGNDKRVKQKRTMSHCSGLNKFGGVGILQGRKGKENSHSVWQKVQKNASDECGGDLKKVNTTLSQLASVVEKDPSVIKECKSVGVNCVSKTEDKKQMKNKIGKKSKVKMDSVSKKGQSNYSRKSLHLNRSLSNDHGKVGAEQNDMLLISTQEIDQHGVNNDSGFNSDVHCLLDGVQTNGVEQVTSEKIHSAEFHLEESDPRSSACHTVANTNNESIDSEDRSLVRPSENVNQSNMSVELSPASCNLEGDEVGQTEKEVSSADYNAQNQCSGTSLWKWIPIGKKDTGLEKYESSTLPPDYSDASSRNNINHESSVEPELASSESKDSSINASRTSNGEIYHHVSCLGEGENEKLGGQVPFTFTQHRDKKEVSSHMFNESKKQEMLEKDSYRISQAVNDACRVQLACEAVHMATGGPVAEFERLLHFGSPVICKSVDSVSCSTCSCNHAGGVSLCRHEIPNLSLGCLWQWYEKHGSYGLEISAQDHENPKRQGVGDFPFRAYFVPSLSAVQLFKNHEDQCVNSSDKLSNCEVSEPRNQDASIETPKETDSISNRSGDLELLFEYFECEQPQQRQPLYEKIQELVRGNMPIQSSTYGDPTKLDSIKLRDLHPSSWFSVAWYPIYRIPDGNFRASFLTYHSLGHLVRRRTGSDLSTSGSCIVSPAVGLQSYNDQGECWFKLKHSAEAAEMVGLDPSFVLRERLKTLEETACVMARAVVKKGNQTCTNRHPDYEFFLSRRRY* 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0792 1147 MobiDBLite consensus disorder prediction 199 214 - -
Vra1g0792 1147 PANTHER DUF789 FAMILY PROTEIN 26 1146 - -
Vra1g0792 1147 MobiDBLite consensus disorder prediction 699 742 - -
Vra1g0792 1147 Pfam Protein of unknown function (DUF789) 827 1141 IPR008507 -
Vra1g0792 1147 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 26 1146 - -
Vra1g0792 1147 MobiDBLite consensus disorder prediction 177 221 - -
Vra1g0792 1147 MobiDBLite consensus disorder prediction 503 547 - -
Vra1g0792 1147 MobiDBLite consensus disorder prediction 622 646 - -
Vra1g0792 1147 MobiDBLite consensus disorder prediction 938 961 - -
Vra1g0792 1147 MobiDBLite consensus disorder prediction 706 742 - -
Vra1g0792 1147 MobiDBLite consensus disorder prediction 184 198 - -
Vra1g0792 1147 MobiDBLite consensus disorder prediction 522 537 - -
Vra1g0792 1147 MobiDBLite consensus disorder prediction 503 521 - -
Vra1g0792 1147 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0792 Vra-Chr1 9408084 9415694 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0792 - - gmx:100798960 1550.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0792 1 9408084 9415694 Vra1g0792 1 9408084 9415694 ECH