Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0789 ATGGCGTTCACTTACGCGGCTGCGATCGCTCCCTCTCTCCGCGGCATTGCTCGCATCGGTTTTTGTGACTACAAGGTTTCGCTTGCCGGTTCTCACAGCGAAGTGAATTCGGCGTCGTTTTGCGTTTCGTCGCGTGCGGGGAAGAATGATGTTTTGCTCGAGAGGAGGAAGTTGAAGTCGGCTGATACTCGCGTTGCCGACAATGCGCAGACGAAATTCAGCGTTGGAATTGAAATTCCTGTTTCGTGCTACCAGCTCATTGGTGTTCCTGATCGGGCAGAGAAAGATGAAATAGTTAAGGCGGTTATGGGTTTGAAAAATGCAGAAATTGATGAAGGTTACACAGTTGATGTTGTTGCAGCTCGTCAGGATCTTCTGATGGATGTTAGGGATAAGCTTCTTTTTGAGCCAGAATATGCTGGCAACCTGAGGGAAAAGATTCCCCCTAAGTCCTCACTTCGAATTACATGGTCTTGGTTGCCTGGTGCTCTTTGCCTTCTTCAAGAGGTTGGAGAATCAAAGCTTGTGCTAGAGATAGGACAGACAAATCTTCAGCACCAAAATGCCAAGCCATATACTGATGATATGATTCTTTCTATGGCGCTAGCTGAGTGTGCAGTTGCGAAGATTGGCTTTGAGAAGAAAAAAGTATCTCAAGGTTTCGAAGCTCTTGCTCGTGCCCAGTGTCTTCTAAGAAGTAAACCATCTCTTTCGAAAATGACACTGCTATATCAGATTGAAGAATCTCTTGAAGAGCTTGCGCCAGCTTGCACCTTGGAACTACTGAGCATGCCACAGGCTCCTGAACATGTTGATAGAAGACGAGGTGCAATTTCAGCTTTGCGTGAATTGCTCAGGCAGGGTCTTGATGTTGAAGCTTCATGCCAAGTACAGGACTGGCCTTCCTTTCTGTGCCAAGCATTTGACAGTTTGCTGGCTAGAGAGATTGTTGATCTTCTTCCTTGGGATAACTTAGTCGTGATGCGAAAGAATAAGAAGACGATTGAATCACAGAATCTAAAGGCAGTAATAGATTCTAATTGTTTTTATAGAGTTTTTAAAGCTCATATGGCAGTCGGGTTTTCCAGCAAGCAGAAAGAGTTGATTAACAAAGCAAAAGGAATATGCGAATGTTTGATAGCTTCAGAGGGTATTGATTTGAAATTTGAGGAATCTTTTTGCTTATTCCTACTTGGTCAGTGCACGGAGGCTGAGGTGGTTGAAAAGCTTAAACAACTTGAGTTAAACTCAAATCCCAAAAATAATTCAGTCTTGGGGAAGGCAATAATGGATGCTTCTGCCGTAAACCCATCATTGGAAATTTGGCTGAAGGATTCAGTTCTTGCATTATTTCCGGATACTAAAGATTGTTCTCCAGCTTTGGGCCATTTCTTTAATGCTCAGCAAAAATTTTCTGGAAGCAAGAATTCTAAAGGAGGAGCTCAACAAGTGTTGCCCACTATATGTCATAGACCTCTATCCTCATCTGGTTCCTTGGAACGAAGAGATGTTGAGGAATCTCGCTCGTACATGAGCTCTTCTCCTACTGTAGGGTTTGCTGTCAAGCAGCTGACTCCTACTGATTTGCGGAGTTCATTGCTATCAGGTAGAAATGAAAATGTAAGCAATCCTATCGAGCCACCAGTTCAAGTGAAAAGGAACCTTGGTAGTCATCGGAGTTCAGGAATTTGGCATGGTTACTTCCCTCAAGGACACATATTTGGAAGAATAACATACTTTACTGTATTGGGTTGTATTGCATTTACTTCCATTAAGTTGTCAGGAATTGGCGTAAGCAAGACTCTTATTGGTTCACATTCGGCTTTTACTAAAGCAAATGATAACATTAATTGGACTTCAGATTCAGCTGACAACCCTGTAGGCCCAGCTTATATTAGGCAAAGTACTGTGGCCAACAAACTGAAGAGGATCCTTTTGATGTTTAAGATACATGTGTTGCAGCAATCAGGTGCCCGAAATCATGATTTACGTCCGACCAGTACCTCGTCTTCTTCTATTAATATTTCCAGAAGGCCAATGCCTGTGGAAGAAGCAGAAACCATTGTTAGGCAATGGCAAACAATCAAAGCTGAAGCTTTGGGACCTAGCCATGAAGTTAGTTCCCTAGCTCAAGTTCTTGACGAATCAATGCTTGCTCAGTGGAACGGTTTGGCCACTGCTGCAAAAGAAAGATCCTGTTACTGGAGATTTCTTTTGCTCAAGTTATCCATCATTCGAGCTGACATTTTATCAGATAGAAATGGAGCTGACGTGGCAGAAATAGAAGCTCTCTTAGAGGAAGCAGCTGAACTCATTGACGGTTCTCGGCAAAAGAACCCTAACTATTATCTCTCTTACAAAGTCAAGTATGCTATGAAGAGGCAAGACGATGGATCATGGAAGTTCTGTGAAAATGATATAATAGAAACACCTTGA 2436 0.429 MAFTYAAAIAPSLRGIARIGFCDYKVSLAGSHSEVNSASFCVSSRAGKNDVLLERRKLKSADTRVADNAQTKFSVGIEIPVSCYQLIGVPDRAEKDEIVKAVMGLKNAEIDEGYTVDVVAARQDLLMDVRDKLLFEPEYAGNLREKIPPKSSLRITWSWLPGALCLLQEVGESKLVLEIGQTNLQHQNAKPYTDDMILSMALAECAVAKIGFEKKKVSQGFEALARAQCLLRSKPSLSKMTLLYQIEESLEELAPACTLELLSMPQAPEHVDRRRGAISALRELLRQGLDVEASCQVQDWPSFLCQAFDSLLAREIVDLLPWDNLVVMRKNKKTIESQNLKAVIDSNCFYRVFKAHMAVGFSSKQKELINKAKGICECLIASEGIDLKFEESFCLFLLGQCTEAEVVEKLKQLELNSNPKNNSVLGKAIMDASAVNPSLEIWLKDSVLALFPDTKDCSPALGHFFNAQQKFSGSKNSKGGAQQVLPTICHRPLSSSGSLERRDVEESRSYMSSSPTVGFAVKQLTPTDLRSSLLSGRNENVSNPIEPPVQVKRNLGSHRSSGIWHGYFPQGHIFGRITYFTVLGCIAFTSIKLSGIGVSKTLIGSHSAFTKANDNINWTSDSADNPVGPAYIRQSTVANKLKRILLMFKIHVLQQSGARNHDLRPTSTSSSSINISRRPMPVEEAETIVRQWQTIKAEALGPSHEVSSLAQVLDESMLAQWNGLATAAKERSCYWRFLLLKLSIIRADILSDRNGADVAEIEALLEEAAELIDGSRQKNPNYYLSYKVKYAMKRQDDGSWKFCENDIIETP* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0789 811 Coils Coil 758 778 - -
Vra1g0789 811 MobiDBLite consensus disorder prediction 491 511 - -
Vra1g0789 811 Pfam ARC6-like, IMS domain 685 802 IPR025344 -
Vra1g0789 811 PANTHER PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC-RELATED 56 808 IPR044685 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0789 - - gmx:100801086 1394.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0789 1 9340805 9346762 Vra1g0789 1 9340805 9346762 ECH