Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0787 ATGGCTCAAGATCTCAAACCCTCCATCAACTCCTTCTCGCTCCCCAAAACCCTAAAGCTCAAGACCAAGCAGCAGGAGCTCCTCATCCGCGTCGCCACACTCGCCCTCATCTACGTCCTCGCCTTCATCACGCGCCTCTTCAGCGTCCTCCGCTATGAGTCCATGATCCACGAGTTCGACCCCTACTTCAACTACCGCACCACGCTCTTCCTCACTCGCAATGGCTTCGCCGAGTTCTGGAACTGGTTCGACTACGAGTCCTGGTACCCGCTCGGCCGCATCATCGGCGGCACGCTTTACCCTGGCCTCATGCTCACCGCCGCTGCCATTCACTCCCTACTCCGCTTCCTCCGCCTCTTCGTTCACATCCGGGAGGTCTGCGTCCTCACGGCCCCTTTCTTCGCCTCCAATACCACTCTCGTCGCGTATTTCTTTGCCAAGGAGGTCTGGGACTCCGGCGCCGGCATTGTTGCCGCGGCGCTCATCGCGATCTGTCCTGGGTACATCTCGCGCTCCGTCGCTGGCTCTTACGATAACGAGGGCGTGGCGATCTTCGCGCTGCTGCTGACCTTTTACCTCTTTGTGAAGGCCGTGAACACTGGGTCGCTGGCGTGGGCTTTGGGTTCGGCGTTTGGGTACTTCTACATGGTGTCCGCGTGGGGAGGTTATGTTTTTATAATCAATTTGGTGCCGCTTTATGTGCTGGTGCTGCTTGTGACTGGGAGGTACTCGTTGAGGTTGTATGTGGCGTATAACTGCATGTATGTCTTGGGGATGCTGCTGGCAATGCAGATTAGATTTGTGGGGTTCCAGCATGTGCAGTCCGGGGAGCACATGGCGTCAATGGGTGTGTTTTTCTTGCTGCAGGTGTTTTTCTTCCTGGATTGGGTGAGGCATTTGCTTAGTGACACCAAGCTCTTTCAGTCCTTTTTGAAGATCACTGTGACCAGTGCGGTTGCTGTTGGTGCTGTGGCTTTGGGAGTGGGCATGGCGTCTGGTTATATTTCTCCATGGACTGGGAGGTTTTACTCCTTGCTTGATCCAACTTATGCCAAGGATCACATTCCGATTATAGCATCTGTCTCTGAGCATCAACCAACTGCATGGTCATCCTTCATGTTTGATTTCCATATCTTGCTGTTCCTTTTCCCTGCTGGTCTCTATTTTTGTTTCAAGCGCTTGTCTGATGCCACAATCTTTTTAGTTATGTATGGTCTTACAAGCATGTACTTTGCTGGGGTTATGGTTCGGTTGATTCTTGTTGCTACCCCTGCTGTGTGCCTCATTAGTGCTATTGCGGTTTCTGCCACCATAAAAAATTTGACACGGGTGGTGAGGGCCAAGAGCCCAGCTGTTCAAAGTGGATCTACTAAAGGAACTAGCACTGCAAAAAGTTCTTCTAAGGGTGTAGTTGACAACTCCCAGCCTTTCCAAAGGAATGGTGCAATTGTGTTACTCCTTGGTGCTTTCTATTTGCTGAGTAGATATGCTATTCACTGCACTTGGGTTACATCAGAGGCTTACTCATCTCCCTCAATTGTCTTGGCTGCGAGGGGTGCTCATGGCCAAAGGGTCATCTTTGATGATTATCGTGAAGCATACTTTTGGCTTCGACAGAACACTCCACCAGATGCTAAGGTGATGTCGTGGTGGGATTATGGTTATCAAATCACTGCCATGGGGAACAGAACTGTAATTGTTGACAATAACACCTGGAACAACACTCACATAGCTACTGTCGGGCGAGCAATGTCATCCTATGAGGATGAGGCTTATGAGATAATGAGATCGCTTGATGTGGACTATGTATTAGTCGTGTTTGGTGGTGTTACTGGTTATTCTTCAGATGACATTAATAAATTTCTTTGGATGGTGAGAATTGGTGGCGGAGTTTTTCCTGTGATAAAGGAACCTGATTACCTTGTGAATGGAGAATATCGAGTAGATAAAGGAGCTGCTCCAAAGATGTTGAACTGTCTCATGTACAAGCTATCTTATTATCGGTTTGGGGAGTTGACAACAGAATATGGAAAGCTACCCGGATATGATCGCGCTAGAGGTGTTGAAATTGGAAATAAGGACATAAAGCTCGAGTACTTGGAAGAGGCATTCACTACACAGAATTGGATAGTTCGTATTTATAAAGTGAAACCTCCTAAAAACAGATGGTAA 2172 0.489 MAQDLKPSINSFSLPKTLKLKTKQQELLIRVATLALIYVLAFITRLFSVLRYESMIHEFDPYFNYRTTLFLTRNGFAEFWNWFDYESWYPLGRIIGGTLYPGLMLTAAAIHSLLRFLRLFVHIREVCVLTAPFFASNTTLVAYFFAKEVWDSGAGIVAAALIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWALGSAFGYFYMVSAWGGYVFIINLVPLYVLVLLVTGRYSLRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSGEHMASMGVFFLLQVFFFLDWVRHLLSDTKLFQSFLKITVTSAVAVGAVALGVGMASGYISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKRLSDATIFLVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATIKNLTRVVRAKSPAVQSGSTKGTSTAKSSSKGVVDNSQPFQRNGAIVLLLGAFYLLSRYAIHCTWVTSEAYSSPSIVLAARGAHGQRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYEIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGEYRVDKGAAPKMLNCLMYKLSYYRFGELTTEYGKLPGYDRARGVEIGNKDIKLEYLEEAFTTQNWIVRIYKVKPPKNRW* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0787 723 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 14 723 IPR003674 GO:0004576|GO:0006486|GO:0016020
Vra1g0787 723 Pfam Oligosaccharyl transferase STT3 subunit 30 509 IPR003674 GO:0004576|GO:0006486|GO:0016020
Vra1g0787 723 Gene3D - 526 676 - -
Vra1g0787 723 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT STT3B 14 723 - -
Vra1g0787 723 MobiDBLite consensus disorder prediction 452 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0787 Vra-Chr1 9326957 9332702 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0787 6 722 Miscellaneous Gene Families AT1G34130 86.231 0.0 1266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0787 K07151 - gmx:100816018 1359.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0787 1 9326957 9332702 Vra1g0787 1 9326957 9332702 ECH