Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0769 ATGGAGAAACTCAGGCCAGCGTGGGCTGTCAAGGCAATCATCGTCATCCTTTTCACTTCGATTCTTTTCCGATGCGTCTGCGGCGAGAATCATACCGTCGGCGGAGCCTCAGGCTGGGATCTCCGTTCCAACATTCAGGCCTGGTCGTCTACGACGACGTTTAATATCGGAGACGATCTCGTATTCTCGTACACGCCAGTTCACGATGTGGTGGAGGTAAACCAACTAGGTTACGACACGTGTACGATAGCTAACGCCCTTGCCACGTACGATAATGGAGAAACCGTGATTCACTTAAGCGGAGCGGGAACGCGCTACTTTGTGTGTGGCAGAATGGGCCACTGTCAACAGGGCCTTAAACTCCAGGTCCAAGTTCTAGCCCAGTCTAACAACGGAAGCAACGACGATCAAAACCAAGGCCCCGGCAACACCACCTCTTCTCCTCCGCCTCCTTCTCCTCCGCAGCCTCGTTCTCCTCCGCGGCCTCCTTCTCCCCCGCCTCACGGTGTCGAACACTCTCCCGCAGATGAGCCCTCACCCTGCGACTGTTCGGGTGCAGACGAGCGTTTTGGGGTGGTGCCGTTAATTACGCTCGTAATTGTGCTCGCTTTCGCCCGCGCTCCTTCTTCCCTTTTCCACGCCTCCGTTTTCATCTCATGCGTTTAA 666 0.5541 MEKLRPAWAVKAIIVILFTSILFRCVCGENHTVGGASGWDLRSNIQAWSSTTTFNIGDDLVFSYTPVHDVVEVNQLGYDTCTIANALATYDNGETVIHLSGAGTRYFVCGRMGHCQQGLKLQVQVLAQSNNGSNDDQNQGPGNTTSSPPPPSPPQPRSPPRPPSPPPHGVEHSPADEPSPCDCSGADERFGVVPLITLVIVLAFARAPSSLFHASVFISCV* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0769 221 PANTHER COPPER ION BINDING / ELECTRON CARRIER PROTEIN-RELATED 30 138 - -
Vra1g0769 221 CDD Phytocyanin 30 125 - -
Vra1g0769 221 MobiDBLite consensus disorder prediction 130 183 - -
Vra1g0769 221 PANTHER BLUE COPPER PROTEIN 30 138 IPR039391 GO:0009055
Vra1g0769 221 Pfam Plastocyanin-like domain 43 118 IPR003245 GO:0009055
Vra1g0769 221 Gene3D - 28 131 IPR008972 -
Vra1g0769 221 ProSiteProfiles Phytocyanin domain profile. 29 127 IPR003245 GO:0009055
Vra1g0769 221 MobiDBLite consensus disorder prediction 144 173 - -
Vra1g0769 221 SUPERFAMILY Cupredoxins 28 126 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0769 Vra-Chr1 9055705 9059481 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0769 13 162 Miscellaneous Gene Families AT2G32300 37.500 1.43e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0769 - - gmx:102664120 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0769 1 9055705 9059481 Vra1g0769 1 9055705 9059481 ECH