Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0682 ATGGAGAGTTCTGAAGAGGAAAATGATGGAGTCTCCGGAAATCATGTCCCCAAGGAACTGATTCGTTTAGCATCTAATGGTGCAAAATTTGTTGACGAAGTACTCAATGGTCAAAATGAATGTTGTCTGGAGAGTTTTCGCATGGATAAACATGTATTTTATAAGTTATGTAATATCCTGCAAGCCAAGGGTTTATTGCGTCACACAAATCGAATCAAAATTGAAGAGCAACTAGCCATATTTGTGTTCATAATTGGACATAATCTACGGACAAGAGCAGTTCAAGAGTTATTTCATTATTCTGGGGAAACTATTAGTCGTCACTTTAACCATGTTTTGAATGCTATAATGTCAATTTCACTGGAACAATTTCAGCCTCCTGGTTCTGTTGTTCCTTCAGAAATCTCTGAAGATCCTAGATTTTATCCATATTTTAAAGATTGTGTGGGAGTAATTGATGGTATACATGTACCAGTGACGGTAGGTGTAGATGAGCAAGGACCTTTCCGCAACAAGAATGGTTTACTTTCACAGAATATTCTGGCAGCTTGCTCGTTTGACCTCAAGTTCCATTATGTTTTGGCTGGATGGGAAGGATCTGCTACAGACTTGCAAGTTTTTAATTCAGCAATTACAAGACGGAGCAAATTGCAGGTCCCTGAAGGTAGATACTACATCGTAGACAGTAAGTATCCAAATGTGCCAGGTTTCGTTGCTCCATATTCCATTCCCTACTACAAGGAATTTCCCAGCGATTTCCACCCACAAGATGCCACAGAACTATTCAATCAACGGCACTCATTATTACGAAACGTCATTGATCGAACTTTTGGGGCTTTAAAGGCACGATTTCCTATATTGATGTCTGCTCCTTCTTACCCATTACAAACACAAGTGAAGTTGGTGGTGGCTGCATGTGCATTACACAATTTCATTCGCAATGAGAAGCCAGATGATTGGATTTTCAAGATGTATGAGCATGGTTCATTTCCAATGGAGGAATCAGAACCCCAATTAGAAATGGCAGTGGAACCAAAGATGGATGTTGAGAGCCAGACTCAGGCATCAGATCATACTTTTGATTCTGAAGAAGTTGTACATGCTTCACAATTAAGGAACTCTATTGCTGCTGAAATGTGGAATGATTTTATCCAAGATTTCCCCCCATGGTACTCAAATATTTTCATGGGACCATAA 1197 0.3952 MESSEEENDGVSGNHVPKELIRLASNGAKFVDEVLNGQNECCLESFRMDKHVFYKLCNILQAKGLLRHTNRIKIEEQLAIFVFIIGHNLRTRAVQELFHYSGETISRHFNHVLNAIMSISLEQFQPPGSVVPSEISEDPRFYPYFKDCVGVIDGIHVPVTVGVDEQGPFRNKNGLLSQNILAACSFDLKFHYVLAGWEGSATDLQVFNSAITRRSKLQVPEGRYYIVDSKYPNVPGFVAPYSIPYYKEFPSDFHPQDATELFNQRHSLLRNVIDRTFGALKARFPILMSAPSYPLQTQVKLVVAACALHNFIRNEKPDDWIFKMYEHGSFPMEESEPQLEMAVEPKMDVESQTQASDHTFDSEEVVHASQLRNSIAAEMWNDFIQDFPPWYSNIFMGP* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0682 398 Pfam DDE superfamily endonuclease 152 310 IPR027806 -
Vra1g0682 398 PANTHER UNCHARACTERIZED 1 388 IPR045249 -
Vra1g0682 398 PANTHER NUCLEASE HARBI1-LIKE PROTEIN 1 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0682 Vra-Chr1 8053176 8058382 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0682 - - gmx:100779133 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0682 1 8053176 8058382 Vra1g0682 1 8053176 8058382 ECH