Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0674 ATGAGAAGGGTACCCTCTATTCTGTTCAGAACGCTCGCCGCCCGACGCGCCACCTCCTACGTCGTCCAAAGCCGCCTTCTCCACGGCAGCGCCTCCGCCACCGCCGCTGACCACTCCCACCGTCGCCGCTTCTCCTACCTCCTCGCTCCCTTTGCCGCCGCGTCTCTCGGCTTCGCCGGCGCCCTCCTCTCTCAGGAAGTCCTCGCTAAGGAACCTCCGCCGCCCGAGGCCCTTCCACGCGAGGTCGTTCTTTACCAGTTCGAGGCTTGCCCTTTCTGCAACAAAGTCAAAGCATTTTTGGACTACTATGATATACCTTACAAAGTTGTAGAAGTCAACCCTCTCAGCAAAAAAGAAATCAAATGGTCTGAATATCAGAAAGTGCCAATATTGATGGTAGATGGCGAGCAGCTAAATGATTCGTCAGCTATAATTGATAAGCTGGGACTTAAGATTCTGTCGAAGAAAATTCCAGAGTCAACTTCTGAGGATGAAGAGACAAAATGGCGACGGTGGGTTGATAACCATTTAGTGCATGTTCTGTCACCGAATATTTATCGAAATACCACTGAAGCACTTGAATCCTTTGAGTATATTACTAGCAACGGCAATTTCAGCTACATAGAAAAACTTTCGGTGAAGTTTGCTGGAGCTGCAGCTATGTATTTTGTGTCTAAGAATCTGAAGAAGAAATACAACATAACTGATGAACGTGCTGCACTTTATGAGGCAGCAGAAACATGGGTAGAAGCTCTAAATGGCCGAGATTTCCTTGGAGGGTCTAAACCTAACTTAGCCGACCTGGCGGTCTTTGGGGTTTTAAAACCCATACGCTATTTGACGTCTGGCAAGGATATGGTGGAGCACACTCGTATTGGTGAGTGGTATGCAAGAATGGAGAGTGCTGTTGGAGAACCTTCCAAGATTAAACCCTAA 936 0.4829 MRRVPSILFRTLAARRATSYVVQSRLLHGSASATAADHSHRRRFSYLLAPFAAASLGFAGALLSQEVLAKEPPPPEALPREVVLYQFEACPFCNKVKAFLDYYDIPYKVVEVNPLSKKEIKWSEYQKVPILMVDGEQLNDSSAIIDKLGLKILSKKIPESTSEDEETKWRRWVDNHLVHVLSPNIYRNTTEALESFEYITSNGNFSYIEKLSVKFAGAAAMYFVSKNLKKKYNITDERAALYEAAETWVEALNGRDFLGGSKPNLADLAVFGVLKPIRYLTSGKDMVEHTRIGEWYARMESAVGEPSKIKP* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0674 311 SFLD Glutathione Transferase (cytosolic) 60 309 IPR040079 -
Vra1g0674 311 SUPERFAMILY GST C-terminal domain-like 156 303 IPR036282 -
Vra1g0674 311 SFLD Prostaglandin E synthase like.1 60 309 IPR034334 GO:0050220
Vra1g0674 311 ProSiteProfiles Glutaredoxin domain profile. 70 168 - -
Vra1g0674 311 ProSitePatterns Glutaredoxin active site. 84 100 IPR011767 -
Vra1g0674 311 Pfam Glutathione S-transferase, N-terminal domain 84 148 IPR004045 -
Vra1g0674 311 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 32 310 - -
Vra1g0674 311 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 80 156 IPR004045 -
Vra1g0674 311 PANTHER PROSTAGLANDIN E SYNTHASE 2-RELATED 32 310 - -
Vra1g0674 311 Gene3D Glutaredoxin 76 155 - -
Vra1g0674 311 Pfam Glutathione S-transferase, C-terminal domain 240 298 - -
Vra1g0674 311 SUPERFAMILY Thioredoxin-like 82 150 IPR036249 -
Vra1g0674 311 CDD GST_C_mPGES2 159 305 IPR034335 -
Vra1g0674 311 Gene3D - 159 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0674 Vra-Chr1 7952880 7956765 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0674 K05309 - gmx:100811576 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0674 1 7952880 7956765 Vra1g0674 1 7952880 7956765 ECH