Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0646 ATGCTTCTTAATCACATTGCCGCCGGATTCTGTTGGGTCGACCCGCAACAACCCGACCGGAACCACGAAACCCGACTCGCTTCCTATGGTTTCCATCGCCGGCGGGTGACGCCGCCGAGTGCGGCGTTCCAAGGCGTGCGAATGGAGAAGAATGGCCGCCAACGGCGATCGATATGCACCGCCGATGAGCTTCACCGGGTCGTGGTTTCGAACTCCGATTGGAAGCTCGCTCTGTGGCGCTACCTTCCTTCTCCCGAGGCACCGTTGAGGAATCACCCGCTTTTGTTGTTGTCAGGGGTTGCTACCAATGCAATTGGCTATGATCTCTCTCCTGAGTCTTCATTTGCTCGGTACATGTCGGCACAAGGTTTTGATACGTGGATTCTTGAGGTTCGGGGTGTTGGGTTGAGCACTATTGGAGATAGCCTGGAGGAAAATGAGGAATGCCTAAAGAATTTGTCTGAGATTGATTCTGCTATTAGTGATGAAATTGGTAAAAACAGTGCTTCTCCAGCAAGATCAATAAGACTTGAGAACCTTGGCTCTCCCGAAGTTACAACTAAATTTGAGGAAATGAGGTTAACAAGGAGTTTCATGGACATTTTTACAAGGATATCTGAAAAGCTTGCAGGCTTTCTGAATCCGGATTCGTTGGAGGGAGGAAAGAACTCTGCACTTGTTGGTCAAATCAAGGATTTCAATCGGAGACTTCGAGCTATTATTGAAGGTCAACAGTTGTTCCCAGCACAGATTTTAGAACTGCAAGACCGATTTTCTGCCACTCTAGAAGAGTTTCAGAAACAGCTTCAGTTGATTGTTAAGTATGATTGGGACTTTGACCATTATCTGGAAGAGGATGTACCTGCAGCGATGGAGTACATAAGAGCTCAATGCCAGCCAAGGGATGGAAAATTGCTTGCAATTGGTCACTCAATGGGGGGTATCTTGTTGTATGCAAGGCTTTCACGTTGCTGTTTTGAAGGAAAGGATTCTGGGTTGGCATCTGTTGTTACTTTGGCATCATCACTGGACTATACCCCTTCAAAATCATCTCTCAAGTTACTTTTACCCCTGGCAGAACCTGCTCAGGCTTTGAACATTCCTGCTATTCCAGTTGGGCCATTGATGGCCACTGTTTATCCCCTTGCTAGCTACCCTCCGTATGTTTTATCTTGGCTGAATTCTCAGATTTCAGCTCAAGATATGATGGATCAAAAACTGTTTGAGAAGCTTGTTTTGAATAACTTCTGTACCATACCTTCCAAGATTCTGTTGCAGTTATCATCAGTTTTCCAAGAAGGTGGTCTACGTGACAGGAGTGGAACATTCTTCTACAAGGACCATCTCTGCAAAATTGATGTTCCTGTCTTAGCCGTCGCTGGTGATCAAGACTTGATCTGTCCTCCTGAAGCTGTATATGAAACGGTGAAGCTTATTCCTGAAGATTTGATTACATACAAAGTCTTTGGGGAGCTTGATGGTCCACACTATGCCCACTATGACTTAGTGGGTGGTCGTCTGGCTGCAGATGAACTGTATCCATGTATAACTGAATTTCTCAGTCAACATGACATGGTTTAG 1581 0.4586 MLLNHIAAGFCWVDPQQPDRNHETRLASYGFHRRRVTPPSAAFQGVRMEKNGRQRRSICTADELHRVVVSNSDWKLALWRYLPSPEAPLRNHPLLLLSGVATNAIGYDLSPESSFARYMSAQGFDTWILEVRGVGLSTIGDSLEENEECLKNLSEIDSAISDEIGKNSASPARSIRLENLGSPEVTTKFEEMRLTRSFMDIFTRISEKLAGFLNPDSLEGGKNSALVGQIKDFNRRLRAIIEGQQLFPAQILELQDRFSATLEEFQKQLQLIVKYDWDFDHYLEEDVPAAMEYIRAQCQPRDGKLLAIGHSMGGILLYARLSRCCFEGKDSGLASVVTLASSLDYTPSKSSLKLLLPLAEPAQALNIPAIPVGPLMATVYPLASYPPYVLSWLNSQISAQDMMDQKLFEKLVLNNFCTIPSKILLQLSSVFQEGGLRDRSGTFFYKDHLCKIDVPVLAVAGDQDLICPPEAVYETVKLIPEDLITYKVFGELDGPHYAHYDLVGGRLAADELYPCITEFLSQHDMV* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0646 526 PIRSF UCP031088_abhydr 182 526 IPR016969 -
Vra1g0646 526 PIRSF UCP031088_abhydr 19 216 IPR016969 -
Vra1g0646 526 SUPERFAMILY alpha/beta-Hydrolases 66 523 IPR029058 -
Vra1g0646 526 Gene3D alpha/beta hydrolase 266 522 IPR029058 -
Vra1g0646 526 Gene3D alpha/beta hydrolase 61 162 IPR029058 -
Vra1g0646 526 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 33 523 - -
Vra1g0646 526 PANTHER LYSOSOMAL ACID LIPASE-RELATED 33 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0646 Vra-Chr1 7523822 7528576 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0646 - - gmx:100808317 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0646 1 7523822 7528576 Vra1g0646 1 7523822 7528576 ECH