Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0641 ATGGCGAACGATACATCATCTGATTCTGATAATGAAATTATCGGAGCACGAGTAAAGCTCTTTGGACATGAAAAACCGATACATCAAGTTCTTGGAGGAGGAAAAGTGGCAGATATACTGTTATGGAGGGACAGAAATTTATCAGCTGCGCTTTTGGGAGGGATGACAGTGATATGGTTTCTATTTGAGATTGTTGAGTACAATTTCGTGACTCTCCTTTGTCACATTTCCATCACCACCATGCTTGTGCTATTCATATGGTCCACAGCTGCAGATATATTCAAATGGAAACCTCCCCAGATTCCAGATATTATTTTACAAGAATCTTTCTTCCAAGATCTTGCTTTCATTCTCCACAGAAGATTCAACCAGTTACTACCAATGCTCCTCCATATTTCATGTGGAATAGACCTGCCAATCTTTCTTCTGAACATTGTGTCCCTCTATATTTTCTCAGTGATTGGAAGCTACTTCAGCTTTGTCAATCTGCTATATATTGGTTTCCTGTGCGTGCACACGCTGCCAATTGTGTATGAACGATATGAGGAAGAAATCAACAATTGGGTGAGCGATATTATAATCGTTCTCAGAAAAAACTACAGGAGCTTTAAGAAGAACTACCTCAACAGAATTCCCAGAGGACCAGTGAAGCCAAAGAAAACTCAATAA 669 0.3961 MANDTSSDSDNEIIGARVKLFGHEKPIHQVLGGGKVADILLWRDRNLSAALLGGMTVIWFLFEIVEYNFVTLLCHISITTMLVLFIWSTAADIFKWKPPQIPDIILQESFFQDLAFILHRRFNQLLPMLLHISCGIDLPIFLLNIVSLYIFSVIGSYFSFVNLLYIGFLCVHTLPIVYERYEEEINNWVSDIIIVLRKNYRSFKKNYLNRIPRGPVKPKKTQ* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0641 222 Pfam Reticulon 36 190 IPR003388 -
Vra1g0641 222 PANTHER RETICULON 4 221 IPR045064 GO:0009617
Vra1g0641 222 PANTHER RETICULON-LIKE PROTEIN B9 4 221 - -
Vra1g0641 222 ProSiteProfiles Reticulon domain profile. 36 222 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0641 Vra-Chr1 7408734 7410358 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0641 - - pvu:PHAVU_004G154000g 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0641 1 7408734 7410358 Vra1g0641 1 7408734 7410358 ECH