Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0617 ATGAAGCAGAAGGAGCAACAAGGCAAAGGTGAAGGTTCATATCTGAAACTCTTTTTTGCTCAACTAGACCTTCTCAACTTCTTTGGTCATGCTCTAGTTTTTGGCATTGGTTTACTCATTGGAATCACACTCACTTTCTTTGTCAACAATTTCTCCTTCGCCAACTTTCAAATTCAACAATCTTCCCTTTCATCCAATACCGTCGAACCGCCACCGTCACCACCGCCGTCACGGCCACCCTTTTCTCCGATCTCCTCCAACATCTCATCACCAATATCAGCCACCCAAACAAAAAATATATCTCAGTATTTTGATTCTACACAAAATAACACCTCATGTTCACCCCAGAAAGATAACCGAACCGTACCTTCTTCTGATTCCTCCTTGGTCAACAACACAACAAGTGTGATGAATTTCACAAGAATTGGGTTGAGTGAATTCTTGAAGCCCCCCATGGCCATGCATGATATGAACGACGAAGAGTTGTTGTGGAAAGCTTCCATGGTTCCCATGATTCACAATCTCCCATTCAAACAGACTCCAAAGGTTGCATTCATGTTTCTGACAAAAGGGCCTGTGATGTTGGCTCCTCTGTGGGAGAGATTCTTCAAAGGAAATGAAGGGTTGTATTCTATCTATGTCCATTCCCACCCTTCTTTCAATGAAACAGTGCCTCCAAGCTCTGTCTTCCATGGCCGCAATATCCCTAGCAAGGAAGTAAGGTGGGGTGAGAACAGCATGATAGAAGCAGAGAGAAGGCTATTAGGGAATGCACTCCTTGATTTCTCGAACCAACGTTTTGTGCTACTCTCAGAATCATGCATCCCTTTGTTCAACTTCAACACCATCTACACTTACCTAATGAACTCAACCAAGACCTTTGTGGAAGCCTACGATCAGCCAGGTGAAGTGGGCCGTGGCAGGTACAGGTCCAAAATGAGGCCCCAGATCAGTCTCTCCCAATGGAGAAAAGGGTCTCAATGGTTCCAAATAGACCGTTTTCTAGCCCTTCAAATAGTCTCTGACCATCACTACTTCCCAGTCTTCTTAAAGTACTGCAACCCTAATTGCTACAGTGATGAACACTACTTGCCCACATTTATCAGCATCAAGTTTTGGAAGAGAAACTCTAACAGAACCTTGACATGGGTTGATTGGTCAAAGGGTGGTGCTCATCCTTCAAGGTTTTACAGAAATCATGTGACCAATGAGTTTTTGAACAAGCTGAGGTTTGGAACATCATGCGAGTACAATGGTCACACCACAAATATTTGTCATTTGTTTGCAAGGAAATTCACCACTCATGCTTTGGGTAGATTGCTCAGATTTGCTCCAAAGCTCATGCAATTCAATTGA 1356 0.4351 MKQKEQQGKGEGSYLKLFFAQLDLLNFFGHALVFGIGLLIGITLTFFVNNFSFANFQIQQSSLSSNTVEPPPSPPPSRPPFSPISSNISSPISATQTKNISQYFDSTQNNTSCSPQKDNRTVPSSDSSLVNNTTSVMNFTRIGLSEFLKPPMAMHDMNDEELLWKASMVPMIHNLPFKQTPKVAFMFLTKGPVMLAPLWERFFKGNEGLYSIYVHSHPSFNETVPPSSVFHGRNIPSKEVRWGENSMIEAERRLLGNALLDFSNQRFVLLSESCIPLFNFNTIYTYLMNSTKTFVEAYDQPGEVGRGRYRSKMRPQISLSQWRKGSQWFQIDRFLALQIVSDHHYFPVFLKYCNPNCYSDEHYLPTFISIKFWKRNSNRTLTWVDWSKGGAHPSRFYRNHVTNEFLNKLRFGTSCEYNGHTTNICHLFARKFTTHALGRLLRFAPKLMQFN* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0617 451 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 6 450 IPR044174 GO:0016757
Vra1g0617 451 MobiDBLite consensus disorder prediction 64 88 - -
Vra1g0617 451 PANTHER CORE-2/I-BRANCHING ENZYME 6 450 - -
Vra1g0617 451 MobiDBLite consensus disorder prediction 68 82 - -
Vra1g0617 451 MobiDBLite consensus disorder prediction 105 129 - -
Vra1g0617 451 Pfam Core-2/I-Branching enzyme 183 409 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0617 Vra-Chr1 7138598 7142971 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0617 - - gmx:100791882 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0617 1 7138598 7142971 Vra7g3158 7 51317690 51320758 ECH
Vra1g0617 1 7138598 7142971 Vra1g0617 1 7138598 7142971 ECH
Vra7g3158 7 51317690 51320758 Vra1g0617 1 7138598 7142971 PCT