Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0608 ATGGCTGTAGGCGGCAAAACCAGAAATATGTTTGAAGGTTTGGTAAAAGAAGGGTCATTTAAATGGTTGCTTGGCAAGAAAAGTTACTTTGATGAAGAATTGGAAGAGATGGAACGTTCTCCTTCTGCTGGGAAGAATTTTATACGAGAGCTCTCTCCTGTTGCAAACCTAGTTGTTCGTAGATGCTCAAAAATCCTTAGGACCTCTTCAATTGATCTTCAGGAGAGCTTCAATCAGGAGGCTTCTGATTCTATAAAGCATCCATCACGATATGCGAGGAATTTATTGGAATATTGCTGTTTCAAGGCACTTTTCCTGACTACACAAATGGCTGGTCATCTCTTTGATAAAACATTCCGGCGTTTGACATTCGACATGATGTTGGCTTGGGAAGTCCCTGCAGCTGACAGCCAACCTTTAACCAGTGTTGACGAGGAGGTATCAGTTGGTTTAGAAGCTTTCTGTCGAATAGCCCCTTCAATTCCTATCATTGCTGATGTCATCATCAGTGAAAATCTTTTTGAGGCGCTGAGTTCATCAACTGATGGTCGCCTTCAGTTCCCCATCTATGACAAGTACCTCAGTGGCTTAGAAAGAGCTATAAGAAAAATGAAGAGCAATTCAGAGTCGTCTCTCTTGGCTGCTGTAAGATCCTCTAGAGAAGAGAAGATTCTCGAGGTTGATGGAACAGTCACAACACAGCCAGTTCTTGAGCATGTAGGAATATCGACCTGGCCTGGAAGGTTAATCCTGACAGATCATGCACTTCATTTCGAAGCACTTCGTGTTGTATCATACGATAAACCAAAAAGATATGACTTGTCAGAAGATCTTAAACAGGTTGTTAAACCTGAGTTGACTGGACCATGGGGTACTCGACTTTTTGACAAGGCAGTCTTCTATAGTTCATCGTCCCTATCAGAACCTGTTATACTAGAGTTTCCAGAACTTAAAGGCCATGCACGTCGTGATTATTGGTTAGCTATCATCCACGAGGTTCTGTATGTTCACAAATTCATAAGCAAATATGGAATTAAAGGGGTTGCACGGGATGAAGTGCTTTGGAAGGCTGTTTTAGGAATTTTGCGTTTACAAGCTATTCAGGATATTAGTTCCCCGATTTCTGTACAGAATGACGCTCTTCTCATGTTTAATTTATGTGATCAGCTTCCAGGTGGAGACTTGGTATTAGAAACCCTTGCAAATATGGCAAACAGAAGAGAGTCAGATCGTGAGAATGATTTCAAGGATGGTGGTGGAATGCGTTCTATCTCAGCCTTGGACATGGTTTCTAACTTAGGATTTGTATTTGGAACAAGTTCAAACAACTCAAATGAAAGCAGGATTGCTGTGGGTGAAATATCTGTTGGAGAAATGACTGAATTGGAAATAGCGATTAAAGAATCTAAGAACAATCATAAAAAGGTTATATCTGCACAAGCCACAGTTGATGGTGTTAAAGTTGACGGTATTGACACTAATTTAGCTGTCATGAAGGAGTTACTTTTTCCTATAAATGAACTTTGGAAGTCTCTTCAAGCTTTGGCATATTGGGATGATCTAAGGAAGTCTTCAGGGTTTTGTTTGTTTTTCAGTTACATCATTTACAGGAATTGGCTTGGCTATGCAGCATCACTGATGCTTATGTTATTTGCTGTTTTTATGATAATTACCCGATGGTTTAGCCAAGGTAAGTCAGTTCCTGAAGTTAAAGTAATAGCTCCTCCCCCAATGAATACAATGGAACAGCTTTTGGCCGTTCAGAATGCTGTCTCTCAAGCTGAACAATTCATCCAGGACGGCAACGTAATTTTGCTCAAGCTTCGCGGCCTGTTGCTGTCCATTTTTCCTCAGGCCACAGAGAAGTTGGCCTTTTGCCTTCTATCAGCAGCCTTGATTTTGGCTTTCATGCCCTATAAATACATAGTTCTGCTACTCTTCTTGGAGATATTCACAAGATATTCGCCTCTGAGAAAAACTAGCACCGAAAGATTGACTAGGAGATTAAAGGAATGGTGGTTCAGCGTACCAGCAGCTCCTGTTACAATTGAAAGAGATAAAGAGGAAAAGAAGAAAAAATAG 2082 0.4083 MAVGGKTRNMFEGLVKEGSFKWLLGKKSYFDEELEEMERSPSAGKNFIRELSPVANLVVRRCSKILRTSSIDLQESFNQEASDSIKHPSRYARNLLEYCCFKALFLTTQMAGHLFDKTFRRLTFDMMLAWEVPAADSQPLTSVDEEVSVGLEAFCRIAPSIPIIADVIISENLFEALSSSTDGRLQFPIYDKYLSGLERAIRKMKSNSESSLLAAVRSSREEKILEVDGTVTTQPVLEHVGISTWPGRLILTDHALHFEALRVVSYDKPKRYDLSEDLKQVVKPELTGPWGTRLFDKAVFYSSSSLSEPVILEFPELKGHARRDYWLAIIHEVLYVHKFISKYGIKGVARDEVLWKAVLGILRLQAIQDISSPISVQNDALLMFNLCDQLPGGDLVLETLANMANRRESDRENDFKDGGGMRSISALDMVSNLGFVFGTSSNNSNESRIAVGEISVGEMTELEIAIKESKNNHKKVISAQATVDGVKVDGIDTNLAVMKELLFPINELWKSLQALAYWDDLRKSSGFCLFFSYIIYRNWLGYAASLMLMLFAVFMIITRWFSQGKSVPEVKVIAPPPMNTMEQLLAVQNAVSQAEQFIQDGNVILLKLRGLLLSIFPQATEKLAFCLLSAALILAFMPYKYIVLLLFLEIFTRYSPLRKTSTERLTRRLKEWWFSVPAAPVTIERDKEEKKKK* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0608 693 Pfam Plant protein of unknown function (DUF639) 460 687 IPR006927 -
Vra1g0608 693 PANTHER HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR (DUF639) 1 693 - -
Vra1g0608 693 PANTHER HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR (DUF639)-RELATED 1 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0608 Vra-Chr1 7054790 7062638 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0608 - - var:108345991 1326.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0608 1 7054790 7062638 Vra1g0608 1 7054790 7062638 ECH