Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0577 ATGGAGGCTCCATTAGGTGGATCCGGATCCGGACCCGAGAGGGACAAATCCACCGCTCCTCCATCCTCTTCTCCGATCTCCGTCGTCTCCGCCTTCTGGAAAGATTTTGAGTTGGAGAAGGAGAAAACAGTATTGGATGAGCAAGGGCTTCGAATTGCGGAGAATCAGGAGAACAGTCAGAAAAATCGACGCAAGCTTGCAGAGAACACTAGAGATTTCAAAAAGGCTTCCCCAGAGGATAAGTTAAGTTTGTTCAATTCCTTGCTTAAGGGGTACCAGGAAGAGGTTGATAATCTTACTAAGAGAGCCAAGTTTGGAGAAAATGCTTTTCTCAACATCTATCAAAAGCTCTATGAAGCTCCCGATCCTTATCCAGCTCTTGTATCGATTGCTGAGCAAGATCTCAAGTTATCTGAACTTGAATCTGAAAACCGGAAAATGAAAGTTGAGCTTGAGGAGTTCAGAACAGAGGCAACTCACTTGAAAAATCAGCAGGCTACAATACGAAGACTTGAGGAGAGAAATAGGCAATTAGAGCAACAGATGGAAGAGAAAGTGAAAGAAATTGTGGAGATTAAACAACGCAGTCTGGCTGAAGAAAACCAGAAAACATTGGAAGTTCTGAAAGAAAGGGAACAAGCACTACAAGACCAGTTACAGCATGCCAAAGACAGTGTTTCTAATATGCAGAAATTGCATGAAATTGCCCAAAACCAGTTGTTTGAACTCCGTGCCCAATCTGAGGAAGAGAGGGCAGCTAAGCAATCGGAGGTTACACTTCTAATGGATGAAGTGGAGCGTGCACAAACAATGCTTCTTAGTTTAGAAAGAGAGAAGGGGCTCCTCCGATCTCAGTTACAAACAGCACATGAAGGTACTGATTCTAAGAATAGTGATAGTTTTGACTCAACTAGTGCACTTGAGAATTCTTTAAATGCCAAAGAAAAGCAAATCTCCGAATTGAACTTGGAACTACACAATATTGAAACAACCTTATCTAATGAAAGAGATGAACACATGAATGATGTCAAGAAACTTACTGCAATGCTCAATGAAAAGGAGGCTGCGCTTGAGGAGATGAAGAAAGAACTTCAAGCAAGGCCTACAGAAAAAACAGTTGATGATTTGCGAAAGAAAGTGAAAATTTTGCAGGCAGTGGGATATAATTCAATTGAAGCTGAAGACTGGGAAGTGGCTACAAGCGGGGAAGAGATGAGCAAGATGGAGTTTCTTCTTCTTGATAAGAACCGTAAAATGGAACATGAACTAACACAGTTGAAGGTCAATCTTTCTGAGAAAAAATCTTTACTGGAAACAGCTGAAGAAAAGATAGCAGAGCTTACGGCGAAGGTTAATGAACAACAAAAATTGATACAGAAGTTGGAAGATGACATATTGAAGGGATACAGTTCCAATTCAAAAGATCGTAAAGGGAACTTCCTTGATGATTGGGATCTTTCAGAAGCGGGAGGGGCTGAGGCCTCTGAGAATACAGACCAAAGGCAAGTATCCTTGGACCAAGATCAGAGCTCAATGCTTAAAGTGATTTGTAATCAACGAGATCGATTTAGGAACCGCTTGCGAGAGACAGAAGAGGAAATAAGGCAATTGAAGGAGAAGATTGGGATATTAACAGTGGAACTGGAAAAGAGTAAAGCTGATAATGTCAAACTATATGGGAAGATGCGTTATGTACAAGATTATAATATTGAGAAAGTGGTTTCAAGGGGTTCGAAAAAGTATGCTGAAGATATTGAAAGTGGTTTCTCGTCAGATGTTGAATCAAAATACAAGAAGATATATGAGGATGATATAAATCCTTTTGCTGCATTCTCGAAAAAGGAAAGGGATCAAAGATACAAGGAGTTGGGATTCAGGGACAGAATTACACTCAGCAGTGGGCGTTTTCTCCTTGGTAACAAGTACGCCCGAACTTTCGCATTCTTTTATACCATTGGATTGCATATCTTGGTCTTCACCTGTCTCTACCGAATGTCTGCTCTCAGTTATCTTAGCAATGGCCCAGAGGAATTCCTTGTTGGAGAGAAAAACGTTGATCTTCCACGTGGGCTGTAG 2076 0.4118 MEAPLGGSGSGPERDKSTAPPSSSPISVVSAFWKDFELEKEKTVLDEQGLRIAENQENSQKNRRKLAENTRDFKKASPEDKLSLFNSLLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYPALVSIAEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATIRRLEERNRQLEQQMEEKVKEIVEIKQRSLAEENQKTLEVLKEREQALQDQLQHAKDSVSNMQKLHEIAQNQLFELRAQSEEERAAKQSEVTLLMDEVERAQTMLLSLEREKGLLRSQLQTAHEGTDSKNSDSFDSTSALENSLNAKEKQISELNLELHNIETTLSNERDEHMNDVKKLTAMLNEKEAALEEMKKELQARPTEKTVDDLRKKVKILQAVGYNSIEAEDWEVATSGEEMSKMEFLLLDKNRKMEHELTQLKVNLSEKKSLLETAEEKIAELTAKVNEQQKLIQKLEDDILKGYSSNSKDRKGNFLDDWDLSEAGGAEASENTDQRQVSLDQDQSSMLKVICNQRDRFRNRLRETEEEIRQLKEKIGILTVELEKSKADNVKLYGKMRYVQDYNIEKVVSRGSKKYAEDIESGFSSDVESKYKKIYEDDINPFAAFSKKERDQRYKELGFRDRITLSSGRFLLGNKYARTFAFFYTIGLHILVFTCLYRMSALSYLSNGPEEFLVGEKNVDLPRGL* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0577 691 Coils Coil 258 278 - -
Vra1g0577 691 MobiDBLite consensus disorder prediction 287 309 - -
Vra1g0577 691 Pfam CASP C terminal 439 668 IPR012955 GO:0006891|GO:0030173
Vra1g0577 691 PANTHER CCAAT DISPLACEMENT PROTEIN-RELATED 25 675 - -
Vra1g0577 691 Coils Coil 416 464 - -
Vra1g0577 691 Coils Coil 304 367 - -
Vra1g0577 691 Coils Coil 82 109 - -
Vra1g0577 691 MobiDBLite consensus disorder prediction 1 26 - -
Vra1g0577 691 MobiDBLite consensus disorder prediction 57 73 - -
Vra1g0577 691 PANTHER HOMEOBOX PROTEIN CUT 25 675 - -
Vra1g0577 691 Coils Coil 50 70 - -
Vra1g0577 691 Coils Coil 130 195 - -
Vra1g0577 691 Coils Coil 198 246 - -
Vra1g0577 691 Coils Coil 513 554 - -
Vra1g0577 691 MobiDBLite consensus disorder prediction 51 73 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0577 K09313 - gmx:100780863 1228.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0577 1 6739564 6749255 Vra1g0577 1 6739564 6749255 ECH