Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1313 ATGCCCCGCGCCACGCTCCCTTCCAACCGCCGACGATTTCCGGCCACGTCTTACCGCCACGCAACCGGTAACTTCACCACCATCATGTTGCCGGAATCCGCCCTCGTTTTCCGGCGGAGCATCGGTGCCGCACTCTTCTTCCTCCTTGTCTCTTTCTCGTGTCTACTCCTCTTCAGAAACGCCGATTACTCTCGCTTCTCCTCTTCCAATCACCTCGGTCGCGTATCTGCTGTTTTTCCGTCCAACGATTCCGTCGCGATAAGCAATGAGTATTCACTTGAAAATATTCTGAATGAGGCTGCTATGAAAGACAAAACTGTTATCTTGACCACATTAAATGAAGCTTGGGCAGCACCAGATTCAATCATTGATCTATTCCTTGAGAGCTTTAGAATTGGAGATCGTACTCGCTGGCTTTTGAATCATTTAGTAATTGTTGCATTAGACCCGAAAGCTTATATGCGTTGTCAGGCAATACACTCCTATTGCTATTTGCTTGCTAATGAAGCCGTTGATTTTCATGAAGAGGCATTTTTCATGACTCCTCGTTACTTGAAGATGATGTGGAGACGGATTGATTTCCTGCGCTCCGTTCTAGAGTTGGGGTACAATTTTGTGTTCACGGATGCTGACATCATGTGGTTTAGAGACCCGTTTCCTCGGTTTCATAGGGATGCAGATTTCCAGATAGCATGTGATCATTTCACAGGCATAGTTGATGATGTACAGAACAGACCCAATGGAGGGTTCAACTTTGTACAGTCCAATAATAGGTCAATTAAGTTTTACAAGTTCTGGCATTCTTCACAAGAAACCTACCCCGGTTACCATGATCAGGATGTTCTCAATTTTATCAAGGTTGACCCTTTCATTACTGATTTAGGACTGAAGATGAAATTCTTGGATACAGCTAATTTCGGTGGGCTTTGTGAGCCAAGTAAAGATTTAAATAAGGTTTGCACGATGCATGCAAATTGTTGCTATGGTATGGATAGTAAACTTCATGATCTTAGAATCATGCTTCAAGATTGGAAATATTATTTGACCTTAGCTCCAAGTTTGAAGAGGTTGTCAATTATTTCCTGGAGGGTACCTCAGAAATGCAGCCTTGATTCTCTGAAGCATCCCGGGGCACCAGAAAAGAGCGTTCAGGAGGATTGA 1161 0.4401 MPRATLPSNRRRFPATSYRHATGNFTTIMLPESALVFRRSIGAALFFLLVSFSCLLLFRNADYSRFSSSNHLGRVSAVFPSNDSVAISNEYSLENILNEAAMKDKTVILTTLNEAWAAPDSIIDLFLESFRIGDRTRWLLNHLVIVALDPKAYMRCQAIHSYCYLLANEAVDFHEEAFFMTPRYLKMMWRRIDFLRSVLELGYNFVFTDADIMWFRDPFPRFHRDADFQIACDHFTGIVDDVQNRPNGGFNFVQSNNRSIKFYKFWHSSQETYPGYHDQDVLNFIKVDPFITDLGLKMKFLDTANFGGLCEPSKDLNKVCTMHANCCYGMDSKLHDLRIMLQDWKYYLTLAPSLKRLSIISWRVPQKCSLDSLKHPGAPEKSVQED* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1313 386 Pfam Nucleotide-diphospho-sugar transferase 140 337 IPR005069 -
Vra11g1313 386 PANTHER EXPRESSED PROTEIN-RELATED 34 375 IPR044821 -
Vra11g1313 386 PANTHER GLYCOSYLTRANSFERASE 34 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1313 Vra-Chr11 16124849 16128127 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1313 - - gmx:100812064 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1313 11 16124849 16128127 Vra11g1313 11 16124849 16128127 ECH