Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1298 ATGTTCTTGTTCCACCATTTTCTGCAGTTCTTATTCTCCCTCAACATCTCAACAACAATGGATTTCAGCCACCCTTCAGCTTTTCTTCTCTGCCTTTTCCTTTTCCTATTCCCTTGTCTGATCTCATCTCAAATCTGCCAGAAAAACTGTGGCAAAGAAACTCTCAAGTACCCTTTTGGTAGTGGCCCTGGTTGTGGTGATCCTCGCTTCCAACCACATGTCACATGCAGCCAACAAAAACTCACCTTCACCACTCACACTGGTTCCTACCCTGTTACCTCTATTGACTATGCCAACGAGGTCATATACATCTCAGATCCCACCATGTCAACATGCTCTTGCACTGTCCCTAGCAAAGGCTTTGGCTTAAACTGGGACGCCCCTTTCACTTTTGCTGATAGAACCATCTTTGCTCTAGTAGACTGTGCAACGAACTCATCATCCATATGCCAAAATGGCTACGATGACGGAAGCAGCTCTAAGCTTCTATGTGACCAAGGGACACCCATTTGCAGTCTTCTATATTCATGCAGACCTATTAGCACCATCAACCTCCCAATCTCAACATGCTGTGTTTACACACCTGTTAATCTTGGACCATCGTTTGAAATGGATCTGCAGAAGCTGCAATGTCCTTCCTACACGGGGTTTTACAATTTCAATGATCAGCAATCGGATCCTGAAAAGTGGAACTATGGAATAGCTCTCAAGTACAAGTTCAGTGTAACAAATGACTATCCTGGTTCATGTGATGCTTGTGAAAGGAGCCATGGAGTGTGTGGATATAATGTTGCCTTTAACTCATTTATCTGCAATTGTCCTAATGGGATTAACACCACAACTGACTGTTACTTCATATCATCTTTTAACAGTGGTTTTAGAAATGGGTTTGCTTGGTTGATCTATCCTGCGGTATGGTCTCTTGTTTGGTTCTTCTTGTAG 942 0.4321 MFLFHHFLQFLFSLNISTTMDFSHPSAFLLCLFLFLFPCLISSQICQKNCGKETLKYPFGSGPGCGDPRFQPHVTCSQQKLTFTTHTGSYPVTSIDYANEVIYISDPTMSTCSCTVPSKGFGLNWDAPFTFADRTIFALVDCATNSSSICQNGYDDGSSSKLLCDQGTPICSLLYSCRPISTINLPISTCCVYTPVNLGPSFEMDLQKLQCPSYTGFYNFNDQQSDPEKWNYGIALKYKFSVTNDYPGSCDACERSHGVCGYNVAFNSFICNCPNGINTTTDCYFISSFNSGFRNGFAWLIYPAVWSLVWFFL* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1298 313 Pfam Wall-associated receptor kinase C-terminal 222 275 IPR032872 -
Vra11g1298 313 Pfam Wall-associated receptor kinase galacturonan-binding 46 106 IPR025287 GO:0030247
Vra11g1298 313 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 27 310 - -
Vra11g1298 313 PANTHER WALL-ASSOCIATED RECEPTOR KINASE, GALACTURONAN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 27 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1298 Vra-Chr11 15921227 15922636 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1298 49 143 Receptor kinase-like Gene Family AT5G02070 30.000 2.58e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1298 - - vra:106777232 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1298 11 15921227 15922636 Vra11g1298 11 15921227 15922636 ECH