Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1280 ATGCCACCCACCATTTATAACTTTAAGTCTTTTAGGTCTTCTGGCTCATTCAATTATTCAACACCAAAAAGAGACTCCGATTCCAATATCCTTACTTTCCACTCAACGGATAAATGGAATGCTCATTTTAAAGCTGTCAAAGAAACTAACAAGCTGATGGTACTTGATTTCACAGCTACATGGTGTGGCCCTTGCAAACTCATGGACCCAGTTCTCCAAGAGTTTGCTGCAAAATACACAGATGCTGAGTTCATCAAGATTGATGTGGAGGAGTTAAACGAAGTGTCTCAAGCACTCCAGGTTTACCAATTGCCAACATTCATACTCGTTAAGAAAGGGAAAGTTGCTGATAGAGTGGTGGGGGTGAAGAAGGAGGAGCTCAAGAGGTCTATAGAGAATCATAGAAAATAA 411 0.4063 MPPTIYNFKSFRSSGSFNYSTPKRDSDSNILTFHSTDKWNAHFKAVKETNKLMVLDFTATWCGPCKLMDPVLQEFAAKYTDAEFIKIDVEELNEVSQALQVYQLPTFILVKKGKVADRVVGVKKEELKRSIENHRK* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1280 136 ProSiteProfiles Thioredoxin domain profile. 1 136 IPR013766 -
Vra11g1280 136 Gene3D Glutaredoxin 15 136 - -
Vra11g1280 136 SUPERFAMILY Thioredoxin-like 20 134 IPR036249 -
Vra11g1280 136 ProSitePatterns Thioredoxin family active site. 54 72 IPR017937 -
Vra11g1280 136 Pfam Thioredoxin 41 132 IPR013766 -
Vra11g1280 136 PANTHER THIOREDOXIN 16 136 - -
Vra11g1280 136 PANTHER THIOREDOXIN 16 136 - -
Vra11g1280 136 CDD TRX_family 41 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1280 Vra-Chr11 15616807 15617734 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1280 K03671 - gmx:100527298 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1280 11 15616807 15617734 Vra11g1280 11 15616807 15617734 ECH
Vra7g0619 7 11494009 11495462 Vra11g1280 11 15616807 15617734 PCT