Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1270 ATGGAACTTGAAGCTCCCCAACTTACCACATGGCAAGGCTATGTGGATTGGAACAACAAACCTGCTCTCAGAGGACGCCATGGAGGCATGTTTGCAGCCTCCTTTGTTCTGGTGGCCGAGATATTGGAGAATCTGGCGTTTTTGGCGAATGCTAGCAACTTGGTTTTGTACCTGAAACAACATATGCACATGTCACCTTCAAAATCTGCTAACAATGTCACCAATTTCATGGGAACTGCCTTCCTTCTTGCCCTCCTTGGTGGTTTCTTATCCGATGCCTTTTTCACCACTTATCGTGTCTACCTGATAAGTGCAGTTATTGAGTTCATGGGTCTGATTGTTCTGACCATCCAAGCTCGTGATCCTTGGTTAAAGGCACCAAAGTGTGACAGAGAGAGTCCATGTGAAGAAGTTAATGGTGGGAGAGCAGCAATGTTGTTTGTTGGGCTGTATCTGGTGGCTTTGGGGGTTGGAGGGATCAAAGGGTCACTGCCAGCACATGGTGGTGAGCAATTTGATGAAACCACCCCGTCTGGTCGGAAGCAGAGATCAACTTTCTTCAACTACTTTGTCTTCTGCCTGTCATGCGGTGCCCTCATTGCAGTTACTTTTGTTGTGTGGATTGAAGACAACAAAGGCTGGCAATGGGGTTTTGCAATTTCTACCATTAGCATTTTTCTATCTATCCCAGTTTTTCTTTCTGGTTCGCCTACTTACAAGAACAAGATCCCTTCTGGAAGTCCACTCACAACCATTTTAAAGGTTCTTCTTGCTGCTGTACTAAATAGCTGCACGTACAAAAACTCTAGCAGTGCTGTTGTTAACATGGCTTCTAGCCCTTCTAATCCAAACTCGGGAAGAATGGAATCAGAACAAGAATCAGTAAAGGCAAACACAACAAATAAAACCCCAACAGGGCAGCTCAAATTTCTCAACAAAGCAGTTACAAACAAGGCAAGGTATTCATCACTAGAATGCAGTGTGGAAGAAGTAGAAGATGTGAAAGTAGTGGTGAAAGTAGTACCTATATTTGCTTGTACAATCATTCTTAACTGTTGCCTGGCTCAGTTGTCTACATTCTCTGTTGAACAAGCTGCTTCTATGAACACAAAGCTTGGTTCCCTAAAGGTGCCACCATCTTCATTACCAGTTTTCCCAGTTGTGTTCATCATGATCCTTGCACCAATTTATGACCACATCATCATCCCCTACACAAGGAAAGCCACCAAATCAGAAATGGGGATCAGCCACCTCCAAAGGATAGGATTTGGATTAGTACTCTCTATAGTTGCCATGGCAGTGGCTGCTCTTGTTGAAATCAAAAGGAAAAGGGTAGCCACTGAGTCAGGCCAAGTTGATGATCCAACGAAACCACTACCTATCACATTCTTGTGGATTGCCTTTCAGTACCTGTTCCTTGGATCCGCTGATCTTTTCACCTTAGCTGGGTTGTTGGAATATTTCTTTTCAGAAGCACCAATAAGGATGAGATCATTGGCCACATCTCTTTCTTGGGCCTCTTTGGCAATGGGGTATTATCTAAGTTCGGCCATTGTATCTGTTGTAAACAGTGTCACTGGAAATGGCACCCACCAACCATGGCTTTCTGGTGCCAACTTTAACCACTATCAGCTGCACAAATTCTATTGGCTCATGTGTGTGCTAAGTGCCTTGAACTTCCTGCATTACCTGTTCTGGGCCACTAGATACAAGTATAGAAATACAGGGACTACTAATTAA 1740 0.4397 MELEAPQLTTWQGYVDWNNKPALRGRHGGMFAASFVLVAEILENLAFLANASNLVLYLKQHMHMSPSKSANNVTNFMGTAFLLALLGGFLSDAFFTTYRVYLISAVIEFMGLIVLTIQARDPWLKAPKCDRESPCEEVNGGRAAMLFVGLYLVALGVGGIKGSLPAHGGEQFDETTPSGRKQRSTFFNYFVFCLSCGALIAVTFVVWIEDNKGWQWGFAISTISIFLSIPVFLSGSPTYKNKIPSGSPLTTILKVLLAAVLNSCTYKNSSSAVVNMASSPSNPNSGRMESEQESVKANTTNKTPTGQLKFLNKAVTNKARYSSLECSVEEVEDVKVVVKVVPIFACTIILNCCLAQLSTFSVEQAASMNTKLGSLKVPPSSLPVFPVVFIMILAPIYDHIIIPYTRKATKSEMGISHLQRIGFGLVLSIVAMAVAALVEIKRKRVATESGQVDDPTKPLPITFLWIAFQYLFLGSADLFTLAGLLEYFFSEAPIRMRSLATSLSWASLAMGYYLSSAIVSVVNSVTGNGTHQPWLSGANFNHYQLHKFYWLMCVLSALNFLHYLFWATRYKYRNTGTTN* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1270 579 PANTHER PROTEIN NRT1/ PTR FAMILY 4.6-LIKE 19 575 - -
Vra11g1270 579 Pfam POT family 99 534 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra11g1270 579 Gene3D MFS general substrate transporter like domains 4 578 IPR036259 -
Vra11g1270 579 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 19 575 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra11g1270 579 MobiDBLite consensus disorder prediction 277 300 - -
Vra11g1270 579 SUPERFAMILY MFS general substrate transporter 34 572 IPR036259 -
Vra11g1270 579 CDD MFS_NPF4 30 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1270 Vra-Chr11 15271356 15275912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1270 1 577 Organic Solute Cotransporters AT1G69850 71.331 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1270 - - gmx:100801999 1013.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1270 11 15271356 15275912 Vra11g1270 11 15271356 15275912 ECH
Vra7g0624 7 11828893 11834480 Vra11g1270 11 15271356 15275912 PCT