Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1269 ATGGCTTTCAAGATCAAGAACCTCCCATCTTTCTTTCTTATTCTTCTTCAAACCATCTTCTTTCAGCTCGTAATTGCCATTGAAAATGGTACAAACACCAAAGGAGGTCACTGGGTGGAGCTCAAGCGCAGCATAGGCATCTCCGCCATGCACATGCAACTAATGTACGACAACAAGGTCGTAATCTTCGACCGCACCGACTTCGGCCCCTCCAACATCTCCCTCTCCCACCACCGCTGCCGCTTCAACCCCCACGACCTCGCCCTCAAGCTCGACTGCACCGCCCACTCCGTCCTCTACGACCTCTCCCACAACACCCTCCGCCCCCTCACCCTCCGCACCGACGCCTGGTGCTCCTCCGGGGCTCTCACCCCCGACGGCTCCCTCCTCCAGACTGGCGGTTTCAACGACGGCTACACCACCCTCCGCTCCTTCACCCCCTGCCCCCAACACAATACCTGCGACTGGCGCGAACTTCGCAACCACAGCCTCTCGAACAGCCGCTGGTACTCCTCCAACCAAATCCTTCCCTCTGGGAAAATCATTGTCGTGGGTGGCCGCAACTCCTTCACCTACGAATTCGTCCCCAAAAACGACGTCGCCTCCAAGTCGTTTCACTACCTCCCCTTCTTGAAACTCACGCGTGACCCCAACCGCGGCGAGGAGAACAATCTTTACCCGTTCTTGCATCTTTTACCAGACGGAAACCTCTTCATCTTCGCCAATCGCAACTCCATCCTCTTCGACTACACCACCAACAAAGTCCTCCGCAACTTCCCTATTATCCCCGGCCAAGAAAAAAGAAACTACCCCAGCACAGCCTCCTCCGTCCTTCTCCCGTTAAACCTAACGGGTCTCAACGGAACGCGTTTGCCAGACGCAGAAATTATGATATGCGGCGGGGCCTACCCCGGCGCGTTTAGCTTGGCCAACACGTTGAAGATTTTTCTAGAAGCTTCCAGAACCTGCGGGAGGTTGAGGGTGACGGATTCGAAACCCGTGTGGGTCATGGAAACCATGCCCACGCCGAGGGTTATGCCTGACATGGTCCTGCTTCCCAATGGGAATGTCATTATCTTGAACGGTGCAATGAATGGTACAGCCGGGTGGGAGAACGCGGCCAACCCGGTTTTGTATCCGGTTTTGTATAGACCCGGTTTGGTTGACCAGTTTCCGAGGTTTCAATTACTGGCGCCAGCGAGTACTCCGAGGATGTATCACTCGTCCGCTGTGCTGGTACCAGATGGGAGGGTTTTAGTGGGCGGGAGCAACCCTCATAGGGTTTATAATTTTCGGGCAAACCCGTACCCGACGGAGTTGAGTTTGGATGCGTATTACCCGGAGTATTTGGAGACCGAGTTTGACTCGTTGCGGCCCTCGATAGTCGCTGTTGAGGCTACGAACAATACGGCGTCGTATGGAGGGATGTTTGCTGTGAATTTTTTGCTACGGGAGTACCGTGTGGGAGGTGTGGGAGTGACGCTGGTGGCGCCGTCATTTACGACGCACTCGTTCGCGATGAACCAGAGGTTGCTTGTGCTGGAGGTGGTGGGGGTTGAGCAGGTGGCGCCGTCAGGGTACAGAGTGGTGGCGCGTGCGCCTCCCTCGCTGACTGTGGCGCCACCTGGGTTCTACATGCTTTTCATCGTGCACGTTGGAGTTCCGAGCGATGCGGTTTGGGTTCAGGTGAAGTGA 1695 0.5581 MAFKIKNLPSFFLILLQTIFFQLVIAIENGTNTKGGHWVELKRSIGISAMHMQLMYDNKVVIFDRTDFGPSNISLSHHRCRFNPHDLALKLDCTAHSVLYDLSHNTLRPLTLRTDAWCSSGALTPDGSLLQTGGFNDGYTTLRSFTPCPQHNTCDWRELRNHSLSNSRWYSSNQILPSGKIIVVGGRNSFTYEFVPKNDVASKSFHYLPFLKLTRDPNRGEENNLYPFLHLLPDGNLFIFANRNSILFDYTTNKVLRNFPIIPGQEKRNYPSTASSVLLPLNLTGLNGTRLPDAEIMICGGAYPGAFSLANTLKIFLEASRTCGRLRVTDSKPVWVMETMPTPRVMPDMVLLPNGNVIILNGAMNGTAGWENAANPVLYPVLYRPGLVDQFPRFQLLAPASTPRMYHSSAVLVPDGRVLVGGSNPHRVYNFRANPYPTELSLDAYYPEYLETEFDSLRPSIVAVEATNNTASYGGMFAVNFLLREYRVGGVGVTLVAPSFTTHSFAMNQRLLVLEVVGVEQVAPSGYRVVARAPPSLTVAPPGFYMLFIVHVGVPSDAVWVQVK* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1269 564 Gene3D - 32 456 IPR037293 -
Vra11g1269 564 CDD E_set_GO_C 454 563 IPR015202 -
Vra11g1269 564 PANTHER F14L17.20 PROTEIN 13 563 - -
Vra11g1269 564 SUPERFAMILY Galactose oxidase, central domain 82 451 IPR011043 -
Vra11g1269 564 Pfam Galactose oxidase-like, Early set domain 458 563 IPR015202 -
Vra11g1269 564 SUPERFAMILY E set domains 454 563 IPR014756 -
Vra11g1269 564 Pfam Glyoxal oxidase N-terminus 50 301 IPR009880 -
Vra11g1269 564 Gene3D Immunoglobulins 457 564 IPR013783 -
Vra11g1269 564 PANTHER SECRETED PROTEIN-RELATED 13 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1269 Vra-Chr11 15261021 15263607 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1269 - - gmx:100813021 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1269 11 15261021 15263607 Vra11g1269 11 15261021 15263607 ECH