Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1263 ATGGGGCAAGTGTTTGGATGCGTTCAAGTGGAGCAGTCAAGTGTAGCCATCAGGGAAGTTTTCGGGAAGTACGATGATGTTCTTGAACCTGGTTGCCACTGTGTCCCATGGTGTCTTGGCAGTCGTGTTGCTGGTGCCCTTTCTTTGCGTGTCAAACAACTTGATGTTCGTTGTGAAACCAAGACAAAGGACAATGTATTTGTTACTGTGGTTGCTTCTATCCAATATCGGGCATTGGCAGAAAAGACAGTGGATGCTTACTACAAACTCAGCAATACCAGAGCACAAATCCAATCCTATGTCTTTGATGTTATCAGAGCAAGTGTTCCAAAGATGGAACTGGATGCTACTTTTGAACAGAAGAATGAAATTGCGAAAGCAGTGGAGGAAGAACTCGAAAAGGCTATGTCAGCTTATGGTTACGAGATAGTTCAGACTCTTATTGTGGATATAGAGCCAGACGAGCATGTGAAGAGAGCCATGAATGAGATAAATGCTGCTGCAAGATTGAGGGTGGCTGCGAAGGAGAAAGCTGAAGCAGAGAAGATATTGCAGATAAAGCGAGCAGAAGGGGATGCAGAATCAAAGTACCTAGCAGGGCTTGGAATTGCTCGTCAGCGGCAAGCCATAGTTGATGGACTGAGGGACAGTGTGTTAGCTTTCTCTGAGAATGTTCCTGGGACAACATCAAAGGATATCATGGACATGGTTCTCATGACTCAATATTTTGACACAATGAAGGACATCGGTGCTTCCTCAAAATCCAATGCTGTTTTCATTCCACATGGACCTGGTGCTGTTCAAGATGTTGCTTCACAGATCAGAAATGGTCTTCTCCAAGGAAATGCATCAGAGTGTTGA 861 0.446 MGQVFGCVQVEQSSVAIREVFGKYDDVLEPGCHCVPWCLGSRVAGALSLRVKQLDVRCETKTKDNVFVTVVASIQYRALAEKTVDAYYKLSNTRAQIQSYVFDVIRASVPKMELDATFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNEINAAARLRVAAKEKAEAEKILQIKRAEGDAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTTSKDIMDMVLMTQYFDTMKDIGASSKSNAVFIPHGPGAVQDVASQIRNGLLQGNASEC* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1263 286 Coils Coil 118 138 - -
Vra11g1263 286 Coils Coil 157 190 - -
Vra11g1263 286 CDD SPFH_like_u4 10 278 - -
Vra11g1263 286 PANTHER HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 2 1 285 - -
Vra11g1263 286 SMART PHB_4 5 165 IPR001107 -
Vra11g1263 286 Gene3D Band 7 domain 42 167 IPR036013 -
Vra11g1263 286 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 1 285 - -
Vra11g1263 286 Pfam SPFH domain / Band 7 family 9 182 IPR001107 -
Vra11g1263 286 SUPERFAMILY Band 7/SPFH domain 46 171 IPR036013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1263 Vra-Chr11 15070959 15072645 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1263 - - gmx:100789295 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1263 11 15070959 15072645 Vra11g1263 11 15070959 15072645 ECH
Vra7g0629 7 11904252 11906713 Vra11g1263 11 15070959 15072645 PCT