Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1235 ATGAAAAAGTTGTATGGAGGTGTTCTGGTCGCATCGCTCTTTATGTTGTTTATGCTTATGTTCCTGCGAAATGGTATCATGAAAACTCCTATTGGTCAAGGTTATTTGACTATTCCTATCCTGGTTAATGGAACTAATCCTCTAGCATGGATAAATCCCACAGTACCACCCGCTATTCAAAATCCAGATGATCATTCTAAAGTTATTTCTTCTGATATTCTAGTATCTAGCCTCTTTGCTGGGAGCAACTTTTCCGAAGACGAGCAACAAGCTCTGCAGACATGGAAGCAATTGAACCACTTAATTGATCACACTCAGGGTTTACCCAGTTCCGCAGAAGCTATAAAGGAGGCTGCCAGTGCATGGAATTCTCTTATTTCCTCAATTGAAGAGCAAAAACACGGTCGTGCAAATGACAGTTCAAGAACCAAAGAGAAGCAGTGTCCCCACTTTCTTAATAAAATGAATTCCACCGAACTTGGTAACAGTAGTTACAAAATGCAAGTACCTTGTGGCCTGACACAAGGTTCTTCCATCACTGTAATTGGCATTCCGAACGGTCTTTTAGGTAATTTCCGGATTGACTTGACTGGAGAACCACTACCTGGGGAACCCGATCCTCCAATTATTTTACACTATAATGTTCGCTTGCATGGGGATAAAATCACTGAAGATCCTGTAATTGTCCAAAACACCTGGACTATAGCTCATGATTGGGGTGAAGAGGATCGTTGTCCATCCCCTACTCCTGAAAAGGTCGAGAAAGTTGATGAATTGGAGCAGTGTAATAAGATTGTAGGGAAGAACATTAGCCAACTTCACACAGCTGGCATGCATTCCCGCACTTCAAGACAATCTTTAGCAGCCGAAGAACAATCGATAAATAGGAAATATTTTCCTTTTAAACAGGGTTTACCATTTGTGGCAACTTTAAGAGTGGGATCTGAGGGAATCCAGATGACAGTTGATGGAAAACACATAACTTCATTTGCTTTTCGTGAAACTTTGGAGCCATGGCTTGTCAGTGAAATAAAAATCTCTGGGGACCTCAGATTAATATCTATTCTTGCTAGTGGTCTGCCCACATCAGAGGATTCAGAGCATATTATTGACCTAGAATCATTGAAATCAAGTCCTATATCTGCACAAATCCCATTGGATCTCTTCATTGGTGTTTTCTCTACTGCTAACAATTTTAAGCGTCGAATGGCCGTAAGAAGAACCTGGATGCAGTACAATGCTGTTCGATCAAATAAGACAGCTGTGCGCTTCTTTGTTGGTTTGCATAAAAGCCCAATAGTTAATGAAGAGTTGTGGAGGGAAGCACAAACTTATGGAGACGTGCAGCTGATGCCATTTGTTGACTACTACAGCCTCATCACATGGAAAACTTTAGCAATCTGCATTTTTGGGACACAAGTTTCGGCAAAGTTTGTCATGAAGACGGATGATGATGCGTTTGTCCGGGTAGATGAAGTTCTAGACTCTTTGCATAAGATCAATGTTGATCATGGGTTACTATATGGACTCATCAATTCGGATTCCAGACCTCATCGAAATACAGATAGCAAATGGTACATCAGCCCAGAGGAATGGAGCGAAGGAACTTATCCTCCGTGGGCACATGGTCCCGGCTACGTGGTCTCACTCGACATAGCAAGAACGGTGGCCAAGAAATTCAGAGAGAACCATTTGAAGATGTTTAAATTAGAAGACGTTGCGATGGGAATCTGGATCGCAGACATGAAAAAGGAAGGTGTAGAAGTTCGGTATGAGAATGAGAACAGAGTGTATCCTGAAGGTTGTAAGGATGGTTATGTGGTTGCCCATTACCAGGGCCCAAGGGAGATGCTCTGTTTGTGGCAGAAACTTGAGGAAGGAAAAGGTGCAAAATGCTGTGGTGATAGGAGATGA 1914 0.4222 MKKLYGGVLVASLFMLFMLMFLRNGIMKTPIGQGYLTIPILVNGTNPLAWINPTVPPAIQNPDDHSKVISSDILVSSLFAGSNFSEDEQQALQTWKQLNHLIDHTQGLPSSAEAIKEAASAWNSLISSIEEQKHGRANDSSRTKEKQCPHFLNKMNSTELGNSSYKMQVPCGLTQGSSITVIGIPNGLLGNFRIDLTGEPLPGEPDPPIILHYNVRLHGDKITEDPVIVQNTWTIAHDWGEEDRCPSPTPEKVEKVDELEQCNKIVGKNISQLHTAGMHSRTSRQSLAAEEQSINRKYFPFKQGLPFVATLRVGSEGIQMTVDGKHITSFAFRETLEPWLVSEIKISGDLRLISILASGLPTSEDSEHIIDLESLKSSPISAQIPLDLFIGVFSTANNFKRRMAVRRTWMQYNAVRSNKTAVRFFVGLHKSPIVNEELWREAQTYGDVQLMPFVDYYSLITWKTLAICIFGTQVSAKFVMKTDDDAFVRVDEVLDSLHKINVDHGLLYGLINSDSRPHRNTDSKWYISPEEWSEGTYPPWAHGPGYVVSLDIARTVAKKFRENHLKMFKLEDVAMGIWIADMKKEGVEVRYENENRVYPEGCKDGYVVAHYQGPREMLCLWQKLEEGKGAKCCGDRR* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1235 637 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 65 626 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vra11g1235 637 Gene3D - 383 599 - -
Vra11g1235 637 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 165 358 IPR001079 GO:0030246
Vra11g1235 637 SUPERFAMILY Concanavalin A-like lectins/glucanases 165 358 IPR013320 -
Vra11g1235 637 Pfam Galactoside-binding lectin 165 356 IPR001079 GO:0030246
Vra11g1235 637 SMART Gal_bind_lectin_2 169 357 IPR001079 GO:0030246
Vra11g1235 637 Gene3D - 157 356 - -
Vra11g1235 637 PANTHER - 65 626 - -
Vra11g1235 637 CDD GLECT 165 355 IPR001079 GO:0030246
Vra11g1235 637 Pfam Galactosyltransferase 400 583 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1235 Vra-Chr11 13878954 13884437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1235 1 633 Glycosyltransferase AT1G26810 63.240 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1235 K14413 - gmx:100782548 1172.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1235 11 13878954 13884437 Vra11g1235 11 13878954 13884437 ECH