Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1232 ATGGAGTCTAAAAATTTCATTTTGGTCAAGCTTCTGCTGCTGCTGCACTATTTGTCCCTTTTCTGTGCTTCACAGGATTTTGATTTCTTCTACTTTGTTCAACAGTGGCCTGGATCATACTGTGACACACAGAAGAATTGTTGCTACCCCACAAGTGGAAAGCCTGATGCAGATTTTGGAATTCATGGTCTGTGGCCTAATTACAATGATGGCTCATACCCTTCTAACTGTGATCCTAGCAACCCTTTCAACCCATCTCAGATATCTGATCTGAGAAGTAGTTTGCAAAACAATTGGCCCACACTTGCATGTCCAAGTGGGGATGGGATGACATTCTGGAGCCATGAATGGAACAAACATGGAACTTGTTCGGAGTCAGTCCTCAAACAGCATGACTATTTTGAAGCAGCTCTCAGCCTTAGACAAAAGGCCAACATCCTCAAAGCTCTTACATCTGCAGGAATTGAACCAAATGGAGGATCGTACAGTTTGAGCAGCATAAAAGGGGCAATAAAGGATGCAATTGGGTACACTCCATTCATTGAGTGCAATGTCGACTCATCTGGGAACAGCCAGCTATACCAAGTTTACTTATGTGTCAACAATTCTGGTTCAGATTTCATTGAGTGCTCTGTATTCCCTCATGGAAAATGTGACTCAGAAATTCAGTTCCCATCTTTTTATGCATAA 690 0.4232 MESKNFILVKLLLLLHYLSLFCASQDFDFFYFVQQWPGSYCDTQKNCCYPTSGKPDADFGIHGLWPNYNDGSYPSNCDPSNPFNPSQISDLRSSLQNNWPTLACPSGDGMTFWSHEWNKHGTCSESVLKQHDYFEAALSLRQKANILKALTSAGIEPNGGSYSLSSIKGAIKDAIGYTPFIECNVDSSGNSQLYQVYLCVNNSGSDFIECSVFPHGKCDSEIQFPSFYA* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1232 229 Pfam Ribonuclease T2 family 27 210 IPR001568 GO:0003723|GO:0033897
Vra11g1232 229 ProSitePatterns Ribonuclease T2 family histidine active site 1. 59 66 IPR018188 GO:0003723|GO:0033897
Vra11g1232 229 ProSitePatterns Ribonuclease T2 family histidine active site 2. 112 123 IPR033130 -
Vra11g1232 229 SUPERFAMILY Ribonuclease Rh-like 21 226 IPR036430 GO:0003723|GO:0033897
Vra11g1232 229 Gene3D - 21 229 IPR036430 GO:0003723|GO:0033897
Vra11g1232 229 CDD RNase_T2_euk 27 224 IPR033697 -
Vra11g1232 229 PANTHER RIBONUCLEASE T2 7 227 IPR001568 GO:0003723|GO:0033897
Vra11g1232 229 PANTHER BNAA02G26660D PROTEIN 7 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1232 Vra-Chr11 13789053 13790594 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1232 K01166 - gmx:100782011 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1232 11 13789053 13790594 Vra11g1232 11 13789053 13790594 ECH