Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1224 ATGGGAACAAGGAGCCTCTTTATGGCTAAGACCCACATTGATTCCATCAGCCTACGAGTTGTGAATGATTTTGTTTGGGTGAACATGTTGTGGGCCTTTGGTTCTCTGCGGGTGTTCCTTTGCAAATATGTGCTCTATGTTTTGGGATTGGTGCTCAGATACATCTTCAGGTTTCTTCATCTGGGAGATGCAAAAGATGAGGCTATTGATCAGAAAGTACCACATGTGGAGAGGAACAAGCTTTCTGATTCTGAGATTGATGGGTTCCGAGAGGAGCTGGCAAGTTTTCTGTTTTGGAGTGATGATTTTCAGGAAAATGAGTGCTCTACCCTTTCCATGGAGATTGCTCCTGAAAGTGAGAAAAGAGATGTAGGAAATAAGTGCTCGGTTCTGATGGACACCCACTGTGATGTTCATGAAGATGGGATGAAAACCGAGGTGCCCGTGAAGAGCTTTGTTTCAAAAGAAATTGAATTTGACATTGGTGAAGCTGGTATGAGTGTTACTCATGAAGATGGCACGGAAGCAGAAAGAGAAACAGAGGAGTTTGTTTCCATGGAAACTAACTCAGATGTTCAAAAGGTTGGTGATGATGAAGCCGAGATTTCTATTTCGACAGAGTATAACTCTGATCTCGATCAAGGAAGTGTGGAGAGAGAAGAGGAAATAGAAGAACCTGCGTCTGGGGAGATTGACCCTGTTGTTCACGAAGAAGTGATGAAAATCGATGGAAATGAAACAAGCAGCGATGTTTTAATGGAGAATATCTCCGAAGAAACTGTAAATGGCGATGGGGAGAAAATAGAAGAAAATGAGGTCTCTGTTTTCAATGAACAAGAGTCCAATGCTCATGGTGATGATACAGAGAGAGAAGAAAAAGAAGAAAATTCATATGGGTGTGTCTCTTTGAACACTAACTCTGTAACAACCACAAGTAAATGCGAGTACTTATCAGGGAAAGATATAAGTGGGTTCATGGAGGAACCAACAACATTGAGGTTCAGTTTTCGAGAATTTTACATGGGTCCAGATGTTTCAACCGTTTCTGATAATGCATATGCCAGCACCGAAATTATTGCCGACAAGGAATTTTCGGAGTTTTGTTCAGAGAAAGACCCTGTATCTCAAGCACAGACAGAGAACTCTGTTCAAGATCAGGTTTCACCTTCTTCCACCCATATTCCACTTCACTTTGAGAGTGAGATGTTTGGTGGATCCGATTCATCCGATGAAGATTATTTTCTTTACAACGAAAACTCAGTCACTTCTGATTCAGAGTCAGAGTCATCAAGCTCAAGTGGTGTAATCTGGGGCAACAGCAACAAAATTGATGATTCAATTGTTTGCCAGTTTCTGGGAGGTAAAAATGGTGGTGAAGGGTTTGAACCTGAGATTCTGAAGCTGATAATGAGAGAGGAAAGGGAAGGAGATGCAGAGGCAAAGCAATCTTCATGTGATGGAAGGATTTCAGAGTTGAGTGCTCGTGGCATTTATTCTGAAGATGGGTATGTGGAAATGGAACCCTACATGAAGGGTTTGAAGCCCTTAAGTGCACATGGTTTTGGTTGTAAAGACTCTGCCAAAGTAGTGGTCAGAGACAAAAAAGAGGAATTCAGGAATGAGTTGGAGAAAAGAGAAGAAACTAGATGGGAGGATGAATTGAGTAATTCAGAATCTGACGAGGGTGACTTTGAATGGGAGCATGATGATCTGGTGGAACAACTGAGATTGGAATTGAAAAATTCAAGGCAAGGAGGACTTGCCACAATTTTAGAAGAAGAGGAGGAGGTAGACGAAGAGGAAGAGGTGGTGGTGGTAGTGGTGGGAGAGGAAGAGGAGGAAAGAGTATCCTCAAGAGTTGTTCAAGATCCAAACCCAGTGGAAATTGAAGAGAAAATTGAACACAAGGATCAAATTGATGAAATTCTACAAGTTTACAAGAGCTATGAAGAGAAGATGAAGAAACTTGATATTTTGAATTACCAGACCATGCATGCATTAGGTCTGCTCCAACTAAAAGACCCTCTCAAATTAATTTCAATACCAAAGTCTTCCATCCAAGGTGCAAAGCCTGTAATCTCTCAGAACTTGTGGCCACGCAAAGCATCAAAGAACTCATCTGACCCATTGATAAAGTTGGTGCATGAACTGCATAGAGATTTGGAATTGGTATATGTTGGGCAGGTTTGCCTCTCTTGGGAAATCCTGTGTTGGCAACACAAGAAAGCCCTTGAGTTACAGCAATATGATTCACAACGGTCTCATAGCCATAGGTATAATCAAGTTGCTGGTGAGTTTCAACTTTTTCAAGTACTAGTTCAAAGATTCATAGAGAATGAACCATTTCAAGGCCCTAGGCTACAGAACTATGTCAAGAACCGATGCGTGATTCGCAACTTGCTCCATGTTCCAGGCATTAAAGAAGATGATAAAGGGTATGAGGAAGAGGATGCTGCTATTGCAAGTGGAAGGTTGGCAGAGATCATCAAGGAATCAATGCGGGTGTTCTGGGAATTTGTTCGAGCAGATAAAGATTACGGGAATGTTATCTTTAAAGCTTCTCAGCACCACAGAATTGATCTTAACGACCCTATGATTCCTGGTCTTATGGTGGAGATTAAAGCACAACTACAGAAAAAGGAGAGAAGGCTGAAGGACATAGTGAGAACTGGGAATTGCATAGTGAAGAAGTTCCAAAAGCACCATGAAGATGAACTTGATCATGAGCAATTGGTTGCTCAGGTGGGGTTGAGATTGATTTCGAGGGTGTTAAACATGACAAAATTGAAAAAAGAACAGGTAATATGGTGTAAAGAAAAGTTACACAGAATCAAGTTTTTGAGCAGGAAGATTGTCCAGGTGGAACCTTCCTTCTTGCTTTTTCCATGTTGA 2892 0.4146 MGTRSLFMAKTHIDSISLRVVNDFVWVNMLWAFGSLRVFLCKYVLYVLGLVLRYIFRFLHLGDAKDEAIDQKVPHVERNKLSDSEIDGFREELASFLFWSDDFQENECSTLSMEIAPESEKRDVGNKCSVLMDTHCDVHEDGMKTEVPVKSFVSKEIEFDIGEAGMSVTHEDGTEAERETEEFVSMETNSDVQKVGDDEAEISISTEYNSDLDQGSVEREEEIEEPASGEIDPVVHEEVMKIDGNETSSDVLMENISEETVNGDGEKIEENEVSVFNEQESNAHGDDTEREEKEENSYGCVSLNTNSVTTTSKCEYLSGKDISGFMEEPTTLRFSFREFYMGPDVSTVSDNAYASTEIIADKEFSEFCSEKDPVSQAQTENSVQDQVSPSSTHIPLHFESEMFGGSDSSDEDYFLYNENSVTSDSESESSSSSGVIWGNSNKIDDSIVCQFLGGKNGGEGFEPEILKLIMREEREGDAEAKQSSCDGRISELSARGIYSEDGYVEMEPYMKGLKPLSAHGFGCKDSAKVVVRDKKEEFRNELEKREETRWEDELSNSESDEGDFEWEHDDLVEQLRLELKNSRQGGLATILEEEEEVDEEEEVVVVVVGEEEEERVSSRVVQDPNPVEIEEKIEHKDQIDEILQVYKSYEEKMKKLDILNYQTMHALGLLQLKDPLKLISIPKSSIQGAKPVISQNLWPRKASKNSSDPLIKLVHELHRDLELVYVGQVCLSWEILCWQHKKALELQQYDSQRSHSHRYNQVAGEFQLFQVLVQRFIENEPFQGPRLQNYVKNRCVIRNLLHVPGIKEDDKGYEEEDAAIASGRLAEIIKESMRVFWEFVRADKDYGNVIFKASQHHRIDLNDPMIPGLMVEIKAQLQKKERRLKDIVRTGNCIVKKFQKHHEDELDHEQLVAQVGLRLISRVLNMTKLKKEQVIWCKEKLHRIKFLSRKIVQVEPSFLLFPC* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1224 963 PANTHER OS09G0413600 PROTEIN 274 963 - -
Vra11g1224 963 PANTHER OS09G0413600 PROTEIN 15 284 - -
Vra11g1224 963 MobiDBLite consensus disorder prediction 277 298 - -
Vra11g1224 963 Coils Coil 870 890 - -
Vra11g1224 963 MobiDBLite consensus disorder prediction 541 564 - -
Vra11g1224 963 Coils Coil 632 659 - -
Vra11g1224 963 MobiDBLite consensus disorder prediction 282 297 - -
Vra11g1224 963 PANTHER FINGER FYVE DOMAIN PROTEIN, PUTATIVE (DUF1666)-RELATED 15 284 - -
Vra11g1224 963 PANTHER FINGER FYVE DOMAIN PROTEIN, PUTATIVE (DUF1666)-RELATED 274 963 - -
Vra11g1224 963 Pfam Protein of unknown function (DUF1666) 719 962 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1224 Vra-Chr11 13545841 13550550 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1224 - - gmx:100784525 1404.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1224 11 13545841 13550550 Vra11g1224 11 13545841 13550550 ECH