Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1221 ATGGCAAAACCACATTCAGCTGATGGTAGGGCTAGAAGCTCCGTGCAGATCTTTATAGTAGTTGGTCTGTGCTGTTTCTTCTATATATTGGGTGCATGGCAGAGAAGTGGTTTTGGAAAGGGAGATAGCATAGCATTGGAGATTACTAAGAAAAGCTCAGACTGTAATATACGCTCTGATTTGAGTTTTGATTCTCACCATGGTGGAGAAGTCAGCAAAATTGATGAATTTGAGTCAAAACCAAAGGTCTTTGAACCTTGCGATGCTCAATTTATCGATTACACCCCTTGCCAAGATCAACGGCGTGCCATGACTTTTCCAAGAGAAAATATGAATTATCGTGAGAGACATTGTCCCCCTGAGGAAGAAAAATTGCACTGTTTGATCCCAGCACCTAAGGGATATGTGACTCCATTTTCATGGCCGAAAAGCCGTGATTATGTTCCATATGCAAATGCGCCATACAAGAGTCTTACAGTTGAGAAGGCTATTCAGAACTGGATCCAGTATGAGGGAAATGTGTTCAGATTCCCGGGGGGTGGAACTCAATTTCCGCAGGGTGCAGACAAATATATTGATCAGCTTGCTTCTGTGATACCTATAAAGGATGGAACAGTTAGGACAGCACTGGACACTGGTTGTGGGGTAGCCAGTTGGGGCGCATATCTCTGGAGCAGGAATGTTATTGCAATGTCATTTGCACCGAGGGACTCTCATGAGGCACAAGTACAGTTTGCTCTTGAAAGAGGTGTACCTGCTGTCATTGGTGTTCTTGGAACCATAAAATTGCCGTATCCATCTGCAGCTTTTGACATGGCACACTGCTCTCGCTGCTTGATTCCCTGGGGAGGAAATGATGGAATGTATATGATGGAGGTTGACCGAGTTCTAAGACCTGGCGGTTATTGGGTGCTGTCTGGTCCTCCAATCAATTGGAAGGCTAACTACAAATCCTGGCAGAGACCCAAAGAGGATCTTGAAGAAGAACAAAGAAAGATTGAAGAGGTTGCTAAGCTCCTATGCTGGGAGAAAAAGTCTGAACAATCTGAAATTGCTATTTGGCAAAAAACTGTTGACTCCGAATCATGTCGCAGCAGACAAGAAGATTCCGGAGTAAAATTCTGTGAGTCGGCAGATGCTAATGATGTCTGGTATAAGAAAATGGAGGTCTGCATTACTCCAACTCCTAGAGTTTCTGGTGATCTTAAGCCTTTTCCAGAAAGGCTTTATGCCGTCCCCTCTAGAATTGCTGGTGGCTCTGTGCCTGGTGTTTCGGTTGAGTCATACAATGATGATAACGAAAAGTGGAAAAAGCATGTAAATGCTTATAAGAAAATTAATCGACTCCTAGATTCTGGAAGGTATCGCAACATTATGGATGTGAATGCTGGATTGGGTGGCTTTGCTGCAGCTATTCAATCAACCAAGTTATGGGTCATGAATGTCGTGCCTACTATAGCCGAGAAAAGTACACTGGGTGTCATATATGAAAGAGGACTTATTGGCATCTATCATGATTGGTGTGAAGCGTTCTCTACATACCCGAGGACATATGACCTCATTCATAGCCATGGTCTCTTTAGTCTCTACAAGGATAAATGCAATGAAGAAGACATTCTTCTTGAGATGGATCGGATTTTACGCCCGGAAGGTGCTGTAATATTCCGCGATGAAGTTGATGTCTTAATTAAGGTAAAGAAATTAGTCGAAGGAATGAGATGGGATACCAAAATGGTGGACCATGAGGATGGTCCCCTTGTTCCTGAGAAGATACTAATTGCTGTCAAGCAGTATTGGGTTGCGAATGTCACATCTGCACAATAA 1824 0.4337 MAKPHSADGRARSSVQIFIVVGLCCFFYILGAWQRSGFGKGDSIALEITKKSSDCNIRSDLSFDSHHGGEVSKIDEFESKPKVFEPCDAQFIDYTPCQDQRRAMTFPRENMNYRERHCPPEEEKLHCLIPAPKGYVTPFSWPKSRDYVPYANAPYKSLTVEKAIQNWIQYEGNVFRFPGGGTQFPQGADKYIDQLASVIPIKDGTVRTALDTGCGVASWGAYLWSRNVIAMSFAPRDSHEAQVQFALERGVPAVIGVLGTIKLPYPSAAFDMAHCSRCLIPWGGNDGMYMMEVDRVLRPGGYWVLSGPPINWKANYKSWQRPKEDLEEEQRKIEEVAKLLCWEKKSEQSEIAIWQKTVDSESCRSRQEDSGVKFCESADANDVWYKKMEVCITPTPRVSGDLKPFPERLYAVPSRIAGGSVPGVSVESYNDDNEKWKKHVNAYKKINRLLDSGRYRNIMDVNAGLGGFAAAIQSTKLWVMNVVPTIAEKSTLGVIYERGLIGIYHDWCEAFSTYPRTYDLIHSHGLFSLYKDKCNEEDILLEMDRILRPEGAVIFRDEVDVLIKVKKLVEGMRWDTKMVDHEDGPLVPEKILIAVKQYWVANVTSAQ* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1221 607 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 93 596 IPR004159 GO:0008168
Vra11g1221 607 Gene3D Vaccinia Virus protein VP39 161 375 IPR029063 -
Vra11g1221 607 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 6 603 IPR004159 GO:0008168
Vra11g1221 607 PANTHER METHYLTRANSFERASE PMT2-RELATED 6 603 - -
Vra11g1221 607 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 332 IPR029063 -
Vra11g1221 607 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 442 558 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1221 Vra-Chr11 13394860 13399748 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1221 - - gmx:100778611 1179.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1221 11 13394860 13399748 Vra11g1221 11 13394860 13399748 ECH