Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1220 ATGGTTATCTCAGAAGTCACTTCCCATCAGTTGCAAACTTTCAATTCTCAGAACAATAACATCTACCACCTACGTGATGCGTCCTTCTCTTCATACTTGAACAGCAAAGAAGAGATCCTGGCTGAATCAGGCCATGGCTTCGCCAGCAACAGAAAGGATACTCTTCTCCATGGAGTAAAGAAGGAAGATGATGGAGAAATTGGAGTGTTTGGGGCTGAAAAGTACTTCAATGGAGAGGCTATGGAAAGCCCCCCAAGAGTTGCTAACAATGATGCAAACAAGAATCAGCCCCAGAAAGATGAACAGACAGCTCTAGTAACTAGAAAGAACAAAGTTCAGTATGGAACTCCAAGTGTTCGGTCTGAGTCAAGTTTGAACAGCCAAAGTGCACTGTTACAAAGTGGTGTGAGAAATTCCTCCAAGAACATGAAAAACAAATTGCGGAGGAAGAGTTTTCTGGCTAGTCTTGGTTGCAAATGCTATTGTTCTGACAGTAATTCTGTTGATATTAGTGACCATGCAGGTGAAATCAACTGCAACAAAGATGCTAGTAATGGAAAAACAACTTCAAGAAATATTTTCAATGCTGATCCAGAAGCTAGTCATTTAGTTAAAATGACTAAGCCTCATGAAGCAGAAATCTTGATCAGCAGGGATGCCTATTTCCAAAGGCCGGAGAAAGTTGCACAGGGATTGAGCAGAGAGAAAAGTTTATCACTCTCATCTGTGACTTCTAGCTCAGGAAATCAATTGGTCAAACTGCAACTTCAAGTAGAGAAGCCGAGGAATTCATTGGAAGTGTTTGGCTCTCCAATATTGGATAGCAGGAGCAAGTCCTTGAGCTTTGATAGAAGGTTGGCAAAATCATCTTGGGAAGCTGCTCCTAAAATTGAAGAAACTGACTTCTCAGAAAATTATGGTGGAAACTACAATGATGCTGAGAGTGATGCAAGTTCAGACTTGTTTGAGATTGAAAGCCTCACAGGCAAATCCAACTCCCTCCTTGCTAGATCGACATCCAATATCGTTTCTAGCTGTGCCAGCCCCACAACTTGTTATGCACCAAGTGAGGCAAGCATAGAATGGAGTGTAGCCACTGCCAGTGCCTTAGAGTACTCAACCATGTCAGATTACGATGATCAAAGGTCAATAGCCACCACTAGGAGTCCAATTAGAACATCCTCAGTTTTCTCAAATGTTAAACCAAAAGTCAACAAAGAGATGCAGAGGAGGCGTCCTAGCATCCTGTTGGGTTGCAAGAGCCAGAAAGCTGTAGGTGTTGCTGGAGATGCATTCACAGCATACGACAAGCCTAGTTCCAACACCCAAATCCGTCGCAGGTCAGACACCTACCCTCAGGTGACAGAGTTTAAGGCAGAAACAAAGGAGGGAATTTTTGGTTCAAGACATAAGCAACATGCTAATGCCACACCCCCACTTCAGCGCTCACTCTCACCACACCCTTCACAACTCTTGTACATTTAG 1485 0.433 MVISEVTSHQLQTFNSQNNNIYHLRDASFSSYLNSKEEILAESGHGFASNRKDTLLHGVKKEDDGEIGVFGAEKYFNGEAMESPPRVANNDANKNQPQKDEQTALVTRKNKVQYGTPSVRSESSLNSQSALLQSGVRNSSKNMKNKLRRKSFLASLGCKCYCSDSNSVDISDHAGEINCNKDASNGKTTSRNIFNADPEASHLVKMTKPHEAEILISRDAYFQRPEKVAQGLSREKSLSLSSVTSSSGNQLVKLQLQVEKPRNSLEVFGSPILDSRSKSLSFDRRLAKSSWEAAPKIEETDFSENYGGNYNDAESDASSDLFEIESLTGKSNSLLARSTSNIVSSCASPTTCYAPSEASIEWSVATASALEYSTMSDYDDQRSIATTRSPIRTSSVFSNVKPKVNKEMQRRRPSILLGCKSQKAVGVAGDAFTAYDKPSSNTQIRRRSDTYPQVTEFKAETKEGIFGSRHKQHANATPPLQRSLSPHPSQLLYI* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1220 494 MobiDBLite consensus disorder prediction 474 488 - -
Vra11g1220 494 MobiDBLite consensus disorder prediction 88 130 - -
Vra11g1220 494 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1 7 463 - -
Vra11g1220 494 MobiDBLite consensus disorder prediction 81 130 - -
Vra11g1220 494 MobiDBLite consensus disorder prediction 462 494 - -
Vra11g1220 494 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1-RELATED 7 463 IPR039615 GO:0009638
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1220 Vra-Chr11 13383124 13385376 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1220 - - gmx:100811572 737.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1220 11 13383124 13385376 Vra11g1220 11 13383124 13385376 ECH