Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1219 ATGGATTTGGGGGTTTCTGATGAGATGTTAGGCACTTTTGTGCCTATAGTAGTTTACTGGATTTATTCTGGGATTTACGTTGTTTTGGGGTCGTTTGCCGAAAGTTATCGGTTACATTCGAAGCAGGAAGAGGACGAAAAAAATTTGGTGTCAAAGGGTGCTGTGGTTAAAGGTGTTCTCCTTCAACAACTAGTTCAGGCCGTGGTTGCAACCCTCTTGTTTGCGCTGACAGGAAGTGATAACCAAAATACGACCAGCCAGAATACTTCTCTACTTGTTTTAGCAAGACAATTTGTTACTGCTATGCTTGTAATGGACGCATGGCAATACTTCATGCACAGATACATGCATCACAACAAGTTCCTATACAAACATATCCACTCTCTGCATCACAGACTCATTGTACCCTATTCATATGGAGCTCTATACAATCACCCTGTGGAGGGGCTTCTGAATGACACTGTTGGTGGTGCTTTATCGTTCTTAGTCTCCGGGATGAGTCCTCGAGCCTCCATCTTCTTCTTCTCGTTTGCCACCATTAAAACTGTTGATGATCACTGTGGGTTATTGCTCCCCGGAAACCTTTTCCATATATTTTTCAAAAACAACTCGGCCTACCATGATGTACACCATCAACTTTATGGCAACAAGTACAACTTCTCACAGCCATTCTTCATCATGTGGGACAGAATCTTGGGTACCTACATGCCATACACATTGGAGGAGAGGGAAGGTGGTGGTTTTGAAACTAAACCTTGCAAAGATTACAAGGATGATTAA 780 0.4269 MDLGVSDEMLGTFVPIVVYWIYSGIYVVLGSFAESYRLHSKQEEDEKNLVSKGAVVKGVLLQQLVQAVVATLLFALTGSDNQNTTSQNTSLLVLARQFVTAMLVMDAWQYFMHRYMHHNKFLYKHIHSLHHRLIVPYSYGALYNHPVEGLLNDTVGGALSFLVSGMSPRASIFFFSFATIKTVDDHCGLLLPGNLFHIFFKNNSAYHDVHHQLYGNKYNFSQPFFIMWDRILGTYMPYTLEEREGGGFETKPCKDYKDD* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1219 259 Pfam Fatty acid hydroxylase 98 234 IPR006694 GO:0005506|GO:0008610|GO:0016491
Vra11g1219 259 PANTHER BNACNNG58690D PROTEIN 1 258 - -
Vra11g1219 259 PANTHER STEROL DESATURASE 1 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1219 Vra-Chr11 13352122 13355802 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1219 1 259 Acyl Lipid Metabolism Gene Families AT1G69640 79.923 1.13e-147 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1219 K04713 - gmx:100778076 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1219 11 13352122 13355802 Vra11g1219 11 13352122 13355802 ECH