Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1208 ATGGGTACTTCTGGCGACAATTTTCTCCAAGTTCTCTTCAAGAACTTCGATGTTCTTGCTCTGCCGTTGGTCACCCTGGTTTACCCTTTATATGCTTCGATAAAGGCCATAGAGAGTAGGTCTAGTATTGATGATCAGCAATGGCTGACTTATTGGGTTCTCTATTCTTTGATCACTCTGTTTGAGCTCACATTTTCCAAAGTTCTTGAAGTGCTTGCCATTTGGCCTTATGCCAAGTTGATACTTAGTTGCTGGCTAGTTCTTCCGCAGTTCAGTGGGGCAGCACATGTTTATAGGCATTATGTTAGACCATTCTATATGAATCCACAAATGCCACAAATGCCAAAGTTTTCAGGAGCCTCTCAAATGTGGTATGTTCCTCGAAAGAACATATTTAGTAAGCAGGATGATGTCCTTTCTGCTGCTGAGAGGTACATGGAAGAGCATGGAACTGAAGCATTTGAAAGACTCATAACCAAGGCTGACAGAGAAGCTAGAGGACGGAGGAACGGAAGTTATATGATCTTTGATGATGATTATATATATTAA 549 0.4135 MGTSGDNFLQVLFKNFDVLALPLVTLVYPLYASIKAIESRSSIDDQQWLTYWVLYSLITLFELTFSKVLEVLAIWPYAKLILSCWLVLPQFSGAAHVYRHYVRPFYMNPQMPQMPKFSGASQMWYVPRKNIFSKQDDVLSAAERYMEEHGTEAFERLITKADREARGRRNGSYMIFDDDYIY* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1208 182 PANTHER HVA22-LIKE PROTEINS 4 181 IPR004345 -
Vra11g1208 182 Pfam TB2/DP1, HVA22 family 29 105 IPR004345 -
Vra11g1208 182 PANTHER HVA22-LIKE PROTEIN 4 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1208 Vra-Chr11 12886500 12888932 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1208 K17279 - gmx:100775940 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1208 11 12886500 12888932 Vra11g1208 11 12886500 12888932 ECH